Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2439 ATGGGGAAAGGTACAGGGAGTTTCGGTAAGAGGAGGAACAAGACTCACACGCTCTGTGTGAGGTGTGGTCGTCGCAGCTTCCACCTTCAGAAGAGTCGGTGTTCTGCGTGTGCTTTCCCCGCTGCGCGCACAAGAAAATATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACAACCGGAACAGGAAGGATGAGGTACCTTCGTCACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGAGGGCACGGAGGCAGCACCAAGGAAGAGGGGAGCAGCTTCCACTGCCTAA 288 0.5521 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAASTA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2439 95 MobiDBLite consensus disorder prediction 71 95 - -
Pvu1g2439 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Pvu1g2439 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Pvu1g2439 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Pvu1g2439 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Pvu1g2439 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Pvu1g2439 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
Pvu1g2439 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2439 Pvu-Chr1 49631826 49632740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2439 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 86.316 4.54e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2439 K02922 - gmx:100809899 194.512