Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2420 ATGGCCAAAACCAGAACACTTGTGCTTGTGTGTGTTTTGACCCTTCTTCTGGTCACAGACATTGCAAAGTCTCAAGAGTTTTTCTTCAACGGATTCGGTGGTGCTTCTGCCACCAACATGGCCTTAAACGGAGGAGCAGTGATTGAGCACAAGGGCTTGCTTCGTTTAACAAACAACACTCAGAGAGTAATTGGGCACGCGTTTTATCCAACTCCAATTCAGTTCAAGCACACCAACAAAAGCTCTTCCACCGACACAAAACTTTTCTCCTTTTCCACTGCTTTTGCATTTGCAATCATCCCTCAGTACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCGCGTCCCTCGCGAACGCGTACCCGAGCCAGTACTTGGGCCTCCTCAACCCAAAAGAACTGGGGAATTTCTCAAACCACCTTTTTGCAGTGGAGTTCGATACCGTCCAAGACTTCGAGTTCGAGGACATCAATGACAACCATGTTGGTGTCAACCTCAACAACATGGTATCCAACAAATCCGTGGAAGCTGCGTTTTTCCCTGAGGACTCAGCCAATAAACAAAACCTGAGTTTGAAGAGTGGTAAAGTGATACAAGCATGGGTTGATTATGATTCATCAAATAACCAATTGGAGGTTAGACTCTCCCCAACTTCCTCCAAACCCACTTACCCAATTTTAAAATACAAAGTAGATCTCTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTGCTTCAACAGGGTTACTAGCAAGCACACACTATATTTTTGGTTGGAGCTTCAAAATAAACGGAGAGGCCAAAACCCTTTCCTTGCACAACCTCCCATCGCTCTCTGTCCCTAACAAAACTCAAAACCACTTAATCTTAGGACTCTCCCTTTCATTCATTCTAACACTCGCCGCAATTTCTCTGGCGTGTTACCTATTCAGAAGGATGAAGAACACCGAAGTAATCGAAGCTTGGGAGAGGGACGTTGTTGGGCCGCACAGATTCCCGTACAAAGAGCTGCACAAAGCCACGAAGTGTTTCAAAGACAAGAACCTCCTCGGGTTTGGAGGGTCCGGTCGCGTCTACAAAGGGGTTCTCCCGAAGACCCACATGGAAATCGCGGTGAAGCGAATCTCCCACGAATCTAAACAACGTGTGCAGGAGTTTGTGTCTGAAGTATCAACCATAGGAAGACTCCGACACAGGAACCTCGTACAGTTACTGGGTTGGTGTCGGAAACAAAACGACCTTCTACTTGTGTACGATTTCATGAAAAATGGAAGCTTGGACAGATACTTGTTCGATCAACCGAAGAAAATACTGACATGGGAGGAAAGGTTTAAGATAATAAAAGGGGTGGGTTTGGGGTTGGTGTATTTGCATGAGGAGTGGGAACAGACGGTGATTCACAGAGACGTCAAAGCTGGGAACGTTTTGCTGGATAACGAGATGAATGGGAGGTTGGGGGATTTTGGGTTGGCCAAGCTTTATGAGCATGGTGCAAACCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCCTTCGGAGCATTGTTGTTGGAGGTGGTGTGTGGGAGAAGACCCATCGACATGAAGGCGTTGCCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACTCCAGGTTGGGTAATGTGTTTGATGAGGTGGAAGTTTTGATGGTGATCAAAGTGGGATTGTTGTGTTCCGCGGAGGCACCGGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTACTTGGAGATGGAGGTGGCGCCTCCGCCGGCGGTGGTGGATGGTGGTGGTGGCTGCTATGGAGAGTTGCATTCGTATTCGCCGTGGTCGTCGGTGGGTGATGACGTGCCGTCGTCGCTTTCACTTTCCGGTGGCCGGTAA 1995 0.4972 MAKTRTLVLVCVLTLLLVTDIAKSQEFFFNGFGGASATNMALNGGAVIEHKGLLRLTNNTQRVIGHAFYPTPIQFKHTNKSSSTDTKLFSFSTAFAFAIIPQYPKLGGHGFAFTISRSASLANAYPSQYLGLLNPKELGNFSNHLFAVEFDTVQDFEFEDINDNHVGVNLNNMVSNKSVEAAFFPEDSANKQNLSLKSGKVIQAWVDYDSSNNQLEVRLSPTSSKPTYPILKYKVDLSPILQDSMYVGFSASTGLLASTHYIFGWSFKINGEAKTLSLHNLPSLSVPNKTQNHLILGLSLSFILTLAAISLACYLFRRMKNTEVIEAWERDVVGPHRFPYKELHKATKCFKDKNLLGFGGSGRVYKGVLPKTHMEIAVKRISHESKQRVQEFVSEVSTIGRLRHRNLVQLLGWCRKQNDLLLVYDFMKNGSLDRYLFDQPKKILTWEERFKIIKGVGLGLVYLHEEWEQTVIHRDVKAGNVLLDNEMNGRLGDFGLAKLYEHGANPSTTRVVGTMGYLAPELTRTGKPTTSSDVYAFGALLLEVVCGRRPIDMKALPEELVLVDWVWERWRMGAPLAVVDSRLGNVFDEVEVLMVIKVGLLCSAEAPEKRPSMRQVVRYLEMEVAPPPAVVDGGGGCYGELHSYSPWSSVGDDVPSSLSLSGGR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2420 664 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 5 664 - -
Pvu1g2420 664 SUPERFAMILY Protein kinase-like (PK-like) 333 623 IPR011009 -
Pvu1g2420 664 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Pvu1g2420 664 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
Pvu1g2420 664 PANTHER - 5 664 - -
Pvu1g2420 664 Gene3D - 23 285 - -
Pvu1g2420 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Pvu1g2420 664 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Pvu1g2420 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 286 IPR013320 -
Pvu1g2420 664 Pfam Protein kinase domain 350 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2420 664 Pfam Legume lectin domain 25 280 IPR001220 GO:0030246
Pvu1g2420 664 CDD STKc_IRAK 356 621 - -
Pvu1g2420 664 ProSiteProfiles Protein kinase domain profile. 350 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2420 664 SMART serkin_6 350 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2420 664 CDD lectin_legume_LecRK_Arcelin_ConA 26 271 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2420 Pvu-Chr1 49524025 49526019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2420 25 633 Receptor kinase-like Gene Family AT3G55550 61.353 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu1g2420 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2420 - - gmx:100804136 1016.53