Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2412 ATGGGTGATGCAATTGATTTGACCAGTGATGGAGGAGTCATTAAGACCATTTTGAGAAAAAGCAAAGCTGACGCTGTTGGTCCAACAGAAAATTTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGATACCGGTGAAGTTTTTGACACAACACATGAAGATAACACTATCTTCTCTTTTGAGCTTGGAAAGGGCAATGTTATCAAGGCTTGGGAAATTGCAGTCAAAACCATGAAGGTCGGAGAAGTTGCAAAAATAACCTGCAAACCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATCCCTCCAGAAGCAACACTTGTTTTTGAAGTTGAGTTAGTTGCCTGTCGGCCAAGGAAGGGCTCCAGTTTGGGAAGTGTTTCAGAGGAGAGGGCCAGGCTTGACGAGCTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGTCAAAGAGGAAGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCTGCTGCTGCACGTGTGCAAGCCAAGTTAGGAGCGAAAAAAGGTCAGGGAAAGGGTAAAGGTAAAGCAAAGTAG 567 0.4497 MGDAIDLTSDGGVIKTILRKSKADAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGNVIKAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPEATLVFEVELVACRPRKGSSLGSVSEERARLDELKKQRELAAAVKEEEKKKREEAKAAAAARVQAKLGAKKGQGKGKGKAK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2412 188 SUPERFAMILY FKBP-like 8 124 - -
Pvu1g2412 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Pvu1g2412 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 188 - -
Pvu1g2412 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 188 - -
Pvu1g2412 188 MobiDBLite consensus disorder prediction 152 188 - -
Pvu1g2412 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Pvu1g2412 188 Gene3D - 2 120 IPR046357 GO:0003755
Pvu1g2412 188 MobiDBLite consensus disorder prediction 152 166 - -
Pvu1g2412 188 Coils Coil 131 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2412 Pvu-Chr1 49472202 49477122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2412 4 126 Calmodulin-binding Proteins AT5G48570 39.062 2.03e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2412 K01802 - gmx:100500018 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2412 1 49472202 49477122 Pvu1g2412 1 49472202 49477122 ECH