Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2409 ATGGTTCTCACTTTGAGCAAGAGAGTGCTATGCTTCATCGTCACTTTGACCTGTCTCTTGCAGCTTACAAAGCCTTCAAACTTGAGGGAAAACACGTTGGTCCAAGGCCATCCCCTTGCAGCAACGAACCGTTTGATTTCGCCTTCAGGTTTATACACACTGCATTTCTTTCAGCTTGATGGTGGCTCTGAAGCTAACACCAAATTCTACCTTGGCATATCAGATAATAACATCTCTTACTATGTTTGGCTTGCCAACAGGGACAATCCAATCCATGATGACCCTGGAGTTCTCACAATTGATGAATATGGCAACCTTAAAATTGTGTCAAGTTCTACCACTATGATACTATATTCAGTTGAAGCAGAAAGTAACAAAAGTGTTAGAGCCTCTTTGCTAGATACAGGAAACTTTGTGCTTCATGAATTGAACTCAGATGGATCTGTGAAGAGGGTGTTATGGCAGAGCTTTGATTACCCCACAGACACAATTTTATCACGGATGAAAATTGGCTATGACAAGCACAGTGGCCACAGGTGGTCTCTAACAGCAAGGAGAAGTTACAGAACTCTTTGGTCAGGATCTTTCTCCTTAAGCCTTGACCCCAAAACTAACCAATTGATTACTAGATGGAGAGGGGCCATTATTTGGAGCAGTGGAGAGTGGAGAAATGGAAGTTTTTGCAATCTGAATTCTTCATCACTTGAGCGAGAGAACTTCAATTTCACTTTCTTTTCAAATGAAAGTTTGACGTACTATGAATATGCTTCAGTTTCTGGTTTTCTCATCATGGGACCATTGGGTATAATCAATGCTAGTGGTGTCCCTTACTCATGTACTGGTAGTGAGATTGTGCATGGTTGTGCAATGCCACAGCCTCCCAAATGTAGGAAAGATAGTGATTTGTACTTGCCAAGTTGGAATAGCTTTGGAGAAATGTCAAGGAAAGGATACATCTTTGATGAAACAGAGAACTTGACCATTTCTGATTGCTGGATGAGGTGCTTGAAAAATTGCTCCTGTGAGGCTTACACTTATGCATTCAAGGATGCAACTGGCTGTGAAATATGGAGCAGAGACACATCAGACTTTCTTGAGAGTAATTCCGGTGTTGGTCGTCCAATTTTCTTCTTTCCCAGCCAAACCAAAACCATTGAAAAGCGTAAGAAGCGAGCAAATATATTCTCTGACATTGGAGAAAATACTGAAATTTCTGATGCATGCGATGAGGGAAGAGAACAATGGAATGAGAAGACAGGCAATGATACACATAAATTCGAGTTTATAACCATTCTTGAGGCAACAGACAATTTCTCTTCCACAAATAAGATTGGAGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTGCCAAATGGTCAAGAAATAGCTATAAAAAGACTTTCAAAAAGCTCAGGACAAGGATTGGTAGAGTTCAGAAATGAAGCTATGCTGATTGTGAAACTGCAGCACACTAACCTAGTGAGGCTTTTAGGATTTTGCATTGACAGAGAAGAAAGAATATTAGTCTATGAATACATGGCCAACAAAAGTTTGAATTTATACCTTTTCGATGCCACCAATAGAACTGAGTTAGATTGGAAGATAAGGTACAAAATTATCCAAGGAATTGCTCAGGGACTTGTATATTTACATCATTATTCAAGGTTAAAAGTTTTACACAGAGATTTGAAGGCTAGCAACATTTTATTAGACAATGAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTCGGATACTTACATTGGCACTAGTGGAAGAAAAAACAAATAAAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGTTATGAGTGGAGTTATCTCAAGCAAAATTGATGTATACAGCTTTGGCGTGCTACTCTTAGAGATTGTGAGTGGAAAGAAGAATATTAGTGATAGTTTTTCACTCAATCTTATAGGATATGCATGGCAATTATGGATTCAAGGGGAAGCTCTAAAGCTAATTGACACATTGTTGAATGGTTCATGCCCCCACATCCAAGTTATAAGATGCATTCATATAGGTCTCTTGTGCACTCAAGACAAAGCAAATGATAGACCCACTATGCTTGAGGTCATTTCTTTTCTTTCAAATGAAAATACCCAATTGCCTTCTCCTCTACAACCTTCACTTTATACCATCAAAAGTGTGAAGGAGGAATCTTGCTCTAACAATGAGTTAACATTGTCAGTGACATCGGGCAGATAA 2238 0.3901 MVLTLSKRVLCFIVTLTCLLQLTKPSNLRENTLVQGHPLAATNRLISPSGLYTLHFFQLDGGSEANTKFYLGISDNNISYYVWLANRDNPIHDDPGVLTIDEYGNLKIVSSSTTMILYSVEAESNKSVRASLLDTGNFVLHELNSDGSVKRVLWQSFDYPTDTILSRMKIGYDKHSGHRWSLTARRSYRTLWSGSFSLSLDPKTNQLITRWRGAIIWSSGEWRNGSFCNLNSSSLERENFNFTFFSNESLTYYEYASVSGFLIMGPLGIINASGVPYSCTGSEIVHGCAMPQPPKCRKDSDLYLPSWNSFGEMSRKGYIFDETENLTISDCWMRCLKNCSCEAYTYAFKDATGCEIWSRDTSDFLESNSGVGRPIFFFPSQTKTIEKRKKRANIFSDIGENTEISDACDEGREQWNEKTGNDTHKFEFITILEATDNFSSTNKIGEGGFGPVYKGKLPNGQEIAIKRLSKSSGQGLVEFRNEAMLIVKLQHTNLVRLLGFCIDREERILVYEYMANKSLNLYLFDATNRTELDWKIRYKIIQGIAQGLVYLHHYSRLKVLHRDLKASNILLDNELNPKISDFGMARILTLALVEEKTNKIVGTYGYMSPEYVMSGVISSKIDVYSFGVLLLEIVSGKKNISDSFSLNLIGYAWQLWIQGEALKLIDTLLNGSCPHIQVIRCIHIGLLCTQDKANDRPTMLEVISFLSNENTQLPSPLQPSLYTIKSVKEESCSNNELTLSVTSGR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2409 745 Gene3D Transferase(Phosphotransferase) domain 1 514 716 - -
Pvu1g2409 745 PIRSF SRK 276 397 IPR024171 GO:0004674
Pvu1g2409 745 PIRSF SRK 375 745 IPR024171 GO:0004674
Pvu1g2409 745 PIRSF SRK 2 265 IPR024171 GO:0004674
Pvu1g2409 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Pvu1g2409 745 SMART blect_4 36 160 IPR001480 -
Pvu1g2409 745 Pfam Protein kinase domain 439 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2409 745 CDD STKc_IRAK 444 706 - -
Pvu1g2409 745 ProSiteProfiles Protein kinase domain profile. 438 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2409 745 SMART ntp_6 305 381 IPR003609 -
Pvu1g2409 745 Gene3D Phosphorylase Kinase; domain 1 401 513 - -
Pvu1g2409 745 Gene3D - 26 157 IPR036426 -
Pvu1g2409 745 SUPERFAMILY Protein kinase-like (PK-like) 422 724 IPR011009 -
Pvu1g2409 745 Pfam D-mannose binding lectin 81 186 IPR001480 -
Pvu1g2409 745 CDD B_lectin 38 160 IPR001480 -
Pvu1g2409 745 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 79 738 - -
Pvu1g2409 745 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 79 738 - -
Pvu1g2409 745 ProSiteProfiles PAN/Apple domain profile. 296 369 IPR003609 -
Pvu1g2409 745 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Pvu1g2409 745 SMART serkin_6 438 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2409 745 Pfam PAN-like domain 324 363 IPR003609 -
Pvu1g2409 745 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 223 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2409 Pvu-Chr1 49395343 49398796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2409 416 722 Receptor kinase-like Gene Family AT4G11480 54.984 4.92e-116 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu1g2409 Pkinase 8.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2409 - - gmx:100782230 1198.34