Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2350 ATGACGGACACAATACCTGCATGTTACGAGGTATCTATAGTTAATCCTAATCAATTCTGGAAAACTGATAAAGTCTTGAAGACAGAACTACCAGTTTTGGCCATTCAAATTGCGTTTGTTGCTGTGTTGTCTCGTGTTTTCTCCATAATCTACAAACCTCTCCATCAAACTCGTCTCATCTCACAAATCTCTGTTGGTTTCCTACTGACGCCACCATTACTTGGAAGATACACGGCAATTTTTGAGTTCATTTTTCCTGTAAATGGGGTCGTCAATGTTGAGATCCTTTCCCACATTGGTCTCATTTTTTATTCATTCCTTAGTGGATTGGAGATGAACTTGAACACCATTCTACACGTGAAGAAGAAAGCTGCAAACATCGCAATTGCTGGGATCGTCTTTCCCATACTCGTTGCACCGGGGTTATATGCTCTGTTTCGAAACATTTATGGATATCATACGATGTTTCCCCTTGAAGAAAGCACAAATAACGCTTATATACTTTGGACTTTAATTCTCACTGTTACAGGTTTTCCTGTGGTAGCACATACACTTTCTGAGCTTAAGCTCCTTTATACTGGTCTTGGAAAAGCGGCTTTAACAGCAGCCATGATTAGTGACACCTATGGTTGGATTCTTTTCATTTTACTTGTTCCGTTTTCAATTAATGGTGAAGGATCTATCTACACTGTGATAAGCACGATAGTGTTCATTGTTGTATGCATCTTTGTGGTACGTCCAATCATTCAATGGTTTATTGATCGCAAGGCTGATAGAGACGAATGGAATGATAACCAATTACTCTTTATAATCATGGGGGTTTTAGCTTGTTCATGCATTTCAGATTTTCTTGGTGCACATGCTATCGTTGGGGCTTTTGTTTATGGATTGATTTTACCTCATGGGAAATTTGCTGACTTGGTCATGTCAATTTCAGATGATTTTGTTGGCGGGTTTTTAGTACCCTTGTTCTTTACTGGAACTGGGATGAGACTTATGTTGAGCTCGATTTTCTCCGAAGGAAGCTGGCCCTTAACAATTATCATCATATTCTTGTTGTGTACTCTAAAGATTTTAAGCACTTTATTTGCCACTGTTTTCTTTGGTATTCGTATTCGAGATGGTTTGACCCTGGGCTTGCTTTTGAATACTAAAGGCGCCATGGCGCTAATAATGCTCAACATTGCTTGGGATAGAAAGATATTTTCTGTGCCTACCTATGCCGTTTTAACTTCTGCTGTTCTTCTGATGACCATAGTTGTGTCTCCCGTCATCAATGCCGTCTACAAACCAAGAAAGAGATTTGAACAGAACAAGCTAAAGACTATTCAGAAACTAAGAGTTGATGCAGAGCTCCGAATTATAGCATGTGTTCACAATACTCGCCAAGCTGCAAGCATGAGTAGCATAATTGAATGTTTCAATCCCATGAGAGTTTCCCCTGTGCATGTTTTTGCCTTGTACCTTATTGAACTCACTGGACGTGCTGCTGCTCTAGTTGCTACACATATAGGGAAGCCAAGTAGCCAACCCGGAGAACAAAACCTGACCAGGTCACAGGAAGAGTTAGAAAGCATTCACAACACATTTGATGCACTTGGAGAGGCATATGATGCTATTAGAATCGATACCTCAAATGTGGTATCAGCATACACCACTATTCATGAGGACATACACCAATCAGCAGATGAGAAACGCTCAAGCTTAATTCTTCTTCCATTTCATAAACAACTAAGTTTAGAAGGTACTCTAGAATTAACCTGTGTTGTATACAAAGATATCAACCAAAATGTGATGCAAGGTGCTCCTTGCTCCGTGGCTATATTTGTTGATCGTGATTTTGGGCCAGTTCCCAAAACGAACCTTCGTATTTGTGTTGTCTTTGTTGGGGGCCCTGATGATCGTGAAGCCTTAGCTATTGCATGGAGAATGGCAGGACATCCAGGAACACAGTTATCAGTGACTCGAATGGTTTTGTTGGATGAAGCAGCAGAAGTAGATGCTTCAGTTCAGGAAGAAGCACAAGGGATATTATCTGCAGTAATAGATACAGATAAGCAAAAAGAGTTAGATGATGAGTATATAAGCTCATTTAGACTTACAGCGGTTAACAATAAAGATTCAATATCCTACTCAGAGATTGATGTTCGTAGTGGTGAAGGTATTCCTGTAGTCCTCCATGAGATAGAAAAGATTGGTTGTGATCTTTACGTAGTTGGACAAGGGAATTGTAGGAACTCTAAGGTGTTGTCAGATTTGCTGGAGTGGTGTGATTGCTTAGAACTTGGAGTTATAGGGGACATTTTGGTGTCAAATAATTTTGGTTCACGTTCGTCTGTGCTAGTTGTTCAACAGTATGGATATGGAGGAATGGAATTTGGAAATAATCTTAACCAGAAGGCCACTAATAAAGCCACATTTGAGTCTGTTCCCTGA 2436 0.4002 MTDTIPACYEVSIVNPNQFWKTDKVLKTELPVLAIQIAFVAVLSRVFSIIYKPLHQTRLISQISVGFLLTPPLLGRYTAIFEFIFPVNGVVNVEILSHIGLIFYSFLSGLEMNLNTILHVKKKAANIAIAGIVFPILVAPGLYALFRNIYGYHTMFPLEESTNNAYILWTLILTVTGFPVVAHTLSELKLLYTGLGKAALTAAMISDTYGWILFILLVPFSINGEGSIYTVISTIVFIVVCIFVVRPIIQWFIDRKADRDEWNDNQLLFIIMGVLACSCISDFLGAHAIVGAFVYGLILPHGKFADLVMSISDDFVGGFLVPLFFTGTGMRLMLSSIFSEGSWPLTIIIIFLLCTLKILSTLFATVFFGIRIRDGLTLGLLLNTKGAMALIMLNIAWDRKIFSVPTYAVLTSAVLLMTIVVSPVINAVYKPRKRFEQNKLKTIQKLRVDAELRIIACVHNTRQAASMSSIIECFNPMRVSPVHVFALYLIELTGRAAALVATHIGKPSSQPGEQNLTRSQEELESIHNTFDALGEAYDAIRIDTSNVVSAYTTIHEDIHQSADEKRSSLILLPFHKQLSLEGTLELTCVVYKDINQNVMQGAPCSVAIFVDRDFGPVPKTNLRICVVFVGGPDDREALAIAWRMAGHPGTQLSVTRMVLLDEAAEVDASVQEEAQGILSAVIDTDKQKELDDEYISSFRLTAVNNKDSISYSEIDVRSGEGIPVVLHEIEKIGCDLYVVGQGNCRNSKVLSDLLEWCDCLELGVIGDILVSNNFGSRSSVLVVQQYGYGGMEFGNNLNQKATNKATFESVP* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2350 811 Pfam Sodium/hydrogen exchanger family 38 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu1g2350 811 Gene3D - 32 439 IPR038770 -
Pvu1g2350 811 Gene3D - 481 748 - -
Pvu1g2350 811 PANTHER CATION/H + ANTIPORTER 5 799 - -
Pvu1g2350 811 PANTHER CATION/H+ EXCHANGER 3 5 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2350 Pvu-Chr1 48869459 48872064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2350 2 786 Antiporter Super Family AT2G13620 36.683 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2350 - - gmx:100818017 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2350 1 48869459 48872064 Pvu1g2350 1 48869459 48872064 ECH