Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g2344 | ATGGCAACTGAACCACCTTTAACGTTCTCTTTGGCTTCTGTGGTTGAAGAGATTCTTCAACAGCAAGCTGGTCGTTTAGACGTGAACTTGGCATTCAGAAAAACTGAAGAAACTTCCTTGAGAAGGTATGAAGCAGCAGGTTGGCTACGGAAGACAGTTGGAGTTGTTCGAGGGAAAGACTTGCCAGCTGAGCCTTCTGAAGAACACTTCCGGATTGGACTGCGTAGTGGGATTATCCTATGTAGTGTTCTTAACAAAATTCAACCTGGATCAGTGTCCAAGGTAGTTGAAAAACCTTGTGATTCTGGTATTATTCCTGATGCAGCAACTGCATATCAATACCAAGAAAATGTAAAGAAATTTCTTGTGGCTGTGGAGGAAATGGGACTTCCTACCTTTGAAGTTTTCGATCTGGAACAGGGAGGAAACTCTGAGAGGGTAGTGGATTGTGTTCTAGAGCTAAAGTCTTATGCCGCAGGAAAACTTGTAGGAGGAAGTGGGTCTGGGAAATTTAGTGGGGCCGCGAATGCAAGGCCACCTATCTCTGCGAAACCACTTTTGAGGAAAAACTCAGAACCATTCATGAACATGAACTCTCTGTGTACTGTGCCATCAGGGGATAGAGATGGTTATATGAGTGATCCCGGACAAGATCGAAGCGAAAGAGGTTCTTTTTCCTTAAATTCACTTGTTCGTCAATATTTGTCCGACAAAAAGCCAGAAGAAATTCTCATTGCAGTGGAATCCTTGCTTAGCAAAGTCATGGTGGAATTTGAACATCGCATGCAAGTCCGATATGCAATGCCTAAAACAACTCAGCAAGATAAAGCACCATCTGAAACTGAATGTTCAATTTCAGAAGCTGCTTCTATTAATGAAAGGGTGAAAGAAAAGGAAGATGAGCAAGATGTACAAGATGAACATGATGTAGGAGATGAACATGATGTAGGAGATGAACACGATGTAAAAGCTGAGCATGATGAACAAGCTGAGCATGACATTCAAGATGAACATAACGAACAAAATAAACAAGAGGAAAGTTATGAAAAGATGTGCAATGAGCATGAAGAATCAAGCCACCAAATTTCGATTTTGAAGCAGCAAAATATAGTTGAGCAACAAAATAGAAGCATACAGGAATTGAAAAACATTGTCAATCAAACAAAATTAGGAATGCAATTTATGCAAAGTGAACACCAGAAGGAGATCATTAATCTAGGCAAGCAGCTACATAGCCTAAGCTCTGCTGCTTCGGGATATCATAAAGTTCTGGAAGAAAACCGCAAGTTATATAATGTAGTGCAAGATCTGAAAGGAAATATTAGAGTATACTGTAGAGTTCGACCTTTCTTGGGTGGTCAACCAAGCCTTTATAGCTCTGTCGGTAACGTGGAAGAGGGAAGTATCTCAATCGTAACTCCTTCCAAAAACGGTAAAGAGGGGAAGAAAACATTTAATTTCAATAGAGCATTTGGTCCTGCTTCAACCCAAGGAGAAGTTTTCGCCGACACACAACCTCTTATTCGTTCTGTTTTGGACGGTTATAATGTCTGCATATTTGCCTACGGCCAGACGGGATCAGGAAAAACATTCACTATGTCTGGGCCAGATGACCTTAACGAGGAGACCATAGGTGTCAACTATCGTGCACTAGGAGACCTTTTCTATCTCTCTGACCAAAGGAAAGATACAATTTCTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAACGAGCAAGTTAGGGACCTACTTACGACAGATGGTGCTAATAAAAGGTTAGATATCCGCAATAGTTCCCTTAGTGGCATCAACGTTCCAGACGCTAACCTTGTTCGGGTTTCATGCACCTCTGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGTGCTGTTGGTTCTACTGCCATGAATGATCGTAGTAGTCGCTCTCACAGTTGTCTTACAGTTCATGTTCAAGGAAAGAACTTGACATCAGGAGGCACTATGCGTGGTAGTATGCATCTTGTTGATCTGGCAGGAAGTGAGAGGGCTGATAAAACTGAGGCTACAGGGGATAGACTTAAGGAGGCTCAGCATATCAACAAGTCACTTTCTGCATTGGGAGATGTAATTTATTCCCTTGCCCAAAAGAGTCCACATGTTCCCTACAGGAACAGCAAACTTACTCAGCTACTTCAAGATTCTCTTGGAGGGCAAGCAAAGACTCTCATGTTTGTTCATATAAGTCCGGAGGCTGACGCTCTTGGAGAAACACTTAGCACACTCAAGTTCGCCGAACGAGTCTCCACTGTTGAACTCGGTGCAGCGCGAGTTAATAAAGACAGTTCAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTTTGAAGGCAGCCTTAGCGAGAAAGGAAGGAGAAGCAGAACATTTTAATCAACCTGTCAATAATAGTGGCAATGAAATACCCAAGTTGAAATCATATGCTTCTTCTCCTCCTCTGCATCGTACTTCGATTGGTGGTGCTTCTCGTAAGCTACCAAAAGATGATTCTACTAGCCCGGATGACCCGAAAAATGTTGCATCAGCGTTGAAAAGACGAAGCCTAGATCTCCATGACGTGCCTACCAGTTCACTTCAATGGCCAACTGCTGCAAGGGAAAGAAAGGAGGATGACAAAGAATCGATTTCTGGAGATTGGGGTGATAATAAGATTTCCATGAACAGAAATGACAGCTTGACTAGCGATGATAGTCTTGTGGGACAGTGGGAAGTAGAAAGCAAACAATCTTCTCCCATGTTAAGTCCCACTTTTCTCTCAGAGCCCTCTAAAACATGTATAGACAACAACTCCTCACACAAAAAGGACAACCAAGAAAATGAAGATTTACAGAGACCCAGTTTTGACATGACTACCACAGATGAATCAGATGAACACGAGATTGGTACAGTAACTAGTGATTCTTCTGAATCAGACTTGCATTGGCCACCACAAATACCCAAACCAATCACCATCTCAAGTGGATTAGGCATTAAAGCAAAGAAAAAAACTAATCTCAGATCAATAAAGAACCCGGACTCCAGGAGTATGATCCCATCATTCATTCCTGCGCCTGTGCCTGTGGCTGTGCCGGTGCCGGTGCCTGTGCCCGTGGCATCAAGGAAACAACCCAGCCCAGTTACTCAAGGCAGAAAGCTCCCAGCATCCTCTGATGTAAGGAGAAGGTTTGGGAATAATGCCAAGTAA | 3225 | 0.4254 | MATEPPLTFSLASVVEEILQQQAGRLDVNLAFRKTEETSLRRYEAAGWLRKTVGVVRGKDLPAEPSEEHFRIGLRSGIILCSVLNKIQPGSVSKVVEKPCDSGIIPDAATAYQYQENVKKFLVAVEEMGLPTFEVFDLEQGGNSERVVDCVLELKSYAAGKLVGGSGSGKFSGAANARPPISAKPLLRKNSEPFMNMNSLCTVPSGDRDGYMSDPGQDRSERGSFSLNSLVRQYLSDKKPEEILIAVESLLSKVMVEFEHRMQVRYAMPKTTQQDKAPSETECSISEAASINERVKEKEDEQDVQDEHDVGDEHDVGDEHDVKAEHDEQAEHDIQDEHNEQNKQEESYEKMCNEHEESSHQISILKQQNIVEQQNRSIQELKNIVNQTKLGMQFMQSEHQKEIINLGKQLHSLSSAASGYHKVLEENRKLYNVVQDLKGNIRVYCRVRPFLGGQPSLYSSVGNVEEGSISIVTPSKNGKEGKKTFNFNRAFGPASTQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDDLNEETIGVNYRALGDLFYLSDQRKDTISYEISVQMLEIYNEQVRDLLTTDGANKRLDIRNSSLSGINVPDANLVRVSCTSDVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGKNLTSGGTMRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIYSLAQKSPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEADALGETLSTLKFAERVSTVELGAARVNKDSSDVKELKEQIASLKAALARKEGEAEHFNQPVNNSGNEIPKLKSYASSPPLHRTSIGGASRKLPKDDSTSPDDPKNVASALKRRSLDLHDVPTSSLQWPTAARERKEDDKESISGDWGDNKISMNRNDSLTSDDSLVGQWEVESKQSSPMLSPTFLSEPSKTCIDNNSSHKKDNQENEDLQRPSFDMTTTDESDEHEIGTVTSDSSESDLHWPPQIPKPITISSGLGIKAKKKTNLRSIKNPDSRSMIPSFIPAPVPVAVPVPVPVPVASRKQPSPVTQGRKLPASSDVRRRFGNNAK* | 1075 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g2344 | 1074 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 7 | 1037 | - | - | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 798 | 995 | - | - | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 841 | 865 | - | - | |
| Pvu1g2344 | 1074 | SMART | kinesin_4 | 438 | 774 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | Coils | Coil | 338 | 358 | - | - | |
| Pvu1g2344 | 1074 | PRINTS | Kinesin heavy chain signature | 514 | 535 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | PRINTS | Kinesin heavy chain signature | 636 | 653 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | PRINTS | Kinesin heavy chain signature | 667 | 685 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | PRINTS | Kinesin heavy chain signature | 716 | 737 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 270 | 288 | - | - | |
| Pvu1g2344 | 1074 | ProSitePatterns | Kinesin motor domain signature. | 666 | 677 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 964 | 978 | - | - | |
| Pvu1g2344 | 1074 | Pfam | Calponin homology (CH) domain | 42 | 158 | IPR001715 | GO:0005515 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 291 | 348 | - | - | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 1042 | 1074 | - | - | |
| Pvu1g2344 | 1074 | Pfam | Kinesin motor domain | 446 | 765 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 804 | 830 | - | - | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 270 | 348 | - | - | |
| Pvu1g2344 | 1074 | Gene3D | - | 31 | 161 | IPR036872 | - | |
| Pvu1g2344 | 1074 | PANTHER | KINESIN-LIKE PROTEIN KIN-14H | 7 | 1037 | - | - | |
| Pvu1g2344 | 1074 | SMART | ch_5 | 41 | 157 | IPR001715 | GO:0005515 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 877 | 892 | - | - | |
| Pvu1g2344 | 1074 | ProSiteProfiles | Kinesin motor domain profile. | 440 | 766 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 941 | 956 | - | - | |
| Pvu1g2344 | 1074 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 440 | 800 | IPR027417 | - | |
| Pvu1g2344 | 1074 | CDD | KISc_C_terminal | 438 | 768 | - | - | |
| Pvu1g2344 | 1074 | ProSiteProfiles | Calponin homology (CH) domain profile. | 39 | 159 | IPR001715 | GO:0005515 | |
| Pvu1g2344 | 1074 | MobiDBLite | consensus disorder prediction | 894 | 940 | - | - | |
| Pvu1g2344 | 1074 | Gene3D | Kinesin motor domain | 435 | 807 | IPR036961 | - | |
| Pvu1g2344 | 1074 | SUPERFAMILY | Calponin-homology domain, CH-domain | 42 | 166 | IPR036872 | - | |
| Pvu1g2344 | 1074 | Coils | Coil | 773 | 800 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g2344 | Pvu-Chr1 | 48818933 | 48824705 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu1g2344 | 428 | 802 | Calmodulin-binding Proteins | AT5G65930 | 40.160 | 9.29e-74 | 265 |