Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2339 ATGTGCAGCCTCATTAGAGGTCTTAGGTATGCGCGTCTCATTTGGAATGACCTGAGTCCGTACTTGGCAGATACAGTTGGAAATCTGGTAACAATCTTATGCTTGAAGCTGGTTTTTAGGAATGAATTGCCTGATACAATTTATACTTTCTCCAAGATCAAAGACGGACACAACAATCCTCTTAAGGTTGTTCTTTGGGATACTGAATCTGGGTCTATAGTTTCTGATGAAGATGATCCACTGTCTTCGATCAAGGTAGAGATTTGCGTCCTTGATGGTGACTTTAATTCAGATGACAGTGAAAATTGGAGCAAAGAATTCAACTCCAAAATCTTACGTCAAAGGGACAATAGAGGGCAGTTACTGAAAGGAGATACTGTTATTGCACTTGAAAATGGAGAAGGTTTCCTCAATGAATTATCATTCACTGATAACTCAAGTTGGATAAGAACACGACGTTTCAGGTTAGGAGTCGTTGTGAAATCAAATTTGAATAACGCAGTAAACATCAGGGAAGGTATAAGTAAACCTTTTACTGTCAAGAACTACAGGAGTGACTTGAACAAGAGACAGAATCCATCCCCCAATGATGAAGTATGGCATTTGAAACATATATCAAAAAAAGGGAAAGCTTTTGAGCAGCTTTCTAAGAACGGGATACACACTGTTGAGGATCTGTTGAATGAGCATGAAACCAATCCATCATCTTTGCAAGAGAAACTGGGCAATATTTGTAAAAGGAAACGGGAAGAAATTATTAAGCAGGCTAAGAAAGCAAAGTATGATAAGACTGGTGTTGCTGAAATGATATCTGATGGACAAAATTATCAATCAGAGAATAATAGTCACAACTCCGATCAGAGGATTGAGCTGATAAAGCATGACTTCGAGAAAACATGGACACAAGCTACTAACAATGGTGCTCCTGATCAAGATAACTGCCTAATTGCTGACGAAGAAGGAATGCCTTTGCTATTCTGGTCATCAGGTTTTGGCAGTACCTCTACTCCATCTGACATAAGCCCTTTGTTCTTTCCCGGTGACGATGAAGCAGCACCAACCAATCATCATTCTTCTTTACCCAACAAAGGAAAAAACAAAATGGTTTGA 1110 0.3919 MCSLIRGLRYARLIWNDLSPYLADTVGNLVTILCLKLVFRNELPDTIYTFSKIKDGHNNPLKVVLWDTESGSIVSDEDDPLSSIKVEICVLDGDFNSDDSENWSKEFNSKILRQRDNRGQLLKGDTVIALENGEGFLNELSFTDNSSWIRTRRFRLGVVVKSNLNNAVNIREGISKPFTVKNYRSDLNKRQNPSPNDEVWHLKHISKKGKAFEQLSKNGIHTVEDLLNEHETNPSSLQEKLGNICKRKREEIIKQAKKAKYDKTGVAEMISDGQNYQSENNSHNSDQRIELIKHDFEKTWTQATNNGAPDQDNCLIADEEGMPLLFWSSGFGSTSTPSDISPLFFPGDDEAAPTNHHSSLPNKGKNKMV* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2339 369 Pfam Calmodulin binding protein central domain 195 258 IPR046830 -
Pvu1g2339 369 Pfam Calmodulin binding protein-like N-terminal domain 35 182 IPR046831 -
Pvu1g2339 369 PANTHER CALMODULIN-BINDING PROTEIN 35 298 - -
Pvu1g2339 369 PANTHER OS02G0177800 PROTEIN 35 298 IPR012416 GO:0005516
Pvu1g2339 369 MobiDBLite consensus disorder prediction 346 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2339 Pvu-Chr1 48783431 48785929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2339 35 325 Calmodulin-binding Proteins AT2G24300 35.849 1.52e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2339 - - vra:106757518 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2339 1 48783431 48785929 Pvu1g2339 1 48783431 48785929 ECH