Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2337 ATGGTATCAACAGGGAAATCTCTTAAGAGGCAACGCAGTGGCAAAGTTCCAATTCAGGACCATAAACGGAGCTATGGTGATACAAAACAAGAGTCAGTCGGTGGCCTGAGAAATGTAATCAACGCACTGTGGCTGAGTGACCACTCATCCTATTTGGAAACTTTTGTGCGAAGAGTGGTTAGAGAGGTGGTGGAAAAAAAATTCCAGGTCCAGGCTCGTCTACCTCCAAGAAAAATGGTTAATCAGGCTGGCATATCCGGAGCCAAACCCTTAAAGTTGTGTTTTCTTAATAAGTTACCTAAAACAATTTATACTCGGTCTAATATAATAGCAGAAGACGAATCACTCCTTCAAATTGCTCTATTTGATCTTAGAACTAAGTCTGTAGTAAAGGAAGGTCCCCTTTCCTCACTAAAGGTAGAGATCTGTATTCTGAATGGTGAGTTCGGATCTGATGGTAGTGAGGAGTGGACAGAAGACGAGTTCAATTCCAATATCTCACGCGAAAGAGAAGGTAGAGAGCCACTTTTAATTGGAGAGAGGTTTATTACTCTAGAAAATGGAGTTGCTTGTATCCCTAAAATTGCCATATCTGACAACTCGAGATGGCAAAGAAGCAGAAGTTTCAGGATTGGAGTTAAAGGTGTGCCACCAAATTCCAATGGAGAAAAGATTCAGGAGGGTAGAAGTGAGCCTGTTATTGTGAAAGATAACAGAGGAGAGTGCTACAAGAAACACTGCCCTCCATCCTTGGATGATGAATTATGGCGCTTGAAGAAAATTGCTAAAGAAGGAGCAATCCACAAACAATTTTCTTTGCATGGAATTCACAACGTGAAGGATCTCTTGCGGCTGTACATAACCAACGAATCATCAGTATATAAAATGCTTGGAGGCATTCGAAAGAAGTCATGGTTAGCAATCACTGAACATGCCAAAACCTGTGTGATAGATGATTACAAGCTCTACAGCTATCACTCAGAAGAACATCAAATAGGCCTGCTATTCAATTCCATCTACATCCTCGTGGGAGTGACATTTAATTGGCAAAATTATTATTCACCAGATACTTTCACTCCCCAAGAAAAGCATTTGGTGGAAATAGTGAAGCAGCAAGCTTACAAAAATGTCAACAATTTGAAAATGATTGATGAAACTAAATTGAACTGCTTAACTCTAGCTGCATGTCTAGAGAAAGAAAGACAGTCTGGCACTACAGATCAAGGTCTGCAACACATGGATATCTCAACTGCACAAGACCAACCAGTAACATACCCAGGTTATAGTCAACCATCTATCTCTACTTCATATACTAATGAAGGAATGCATGACAGCCAAGTTTATGCCGATCCACTGCCAGACACAGGAGAAATGCCGCATAATAGTCATGTGTTAGAAGAATTTTCCTCTGAAATGTACACTGAAGGGGATAGTTGTCACTTTAACGGATCGTGTTTCCCATTCCTTGAAGGTGGATATTCAATAGAGAATGAAAGCTCAGACATTCAATTCATAGATGGTTGTCCTCATTATGCAACATGGGAGCCCAAAAATAACATTTTATTTGGTTCTTGTGATGGAGAAGAATTTAACAGTTATTCTACTTTCATAAATTCTTCTGTGGACATATCAAGTAGTGGCAAACCCAAAGCAGCGTGGTGTAAGATTGGTTTCGTTCTGAAATGGGTGATATCAGTGAAAAGGCATGCAGCTGCCAAAAGGAATGCTCAGCTATCATACCATGTTTTACCATGTAACTATTAG 1764 0.4008 MVSTGKSLKRQRSGKVPIQDHKRSYGDTKQESVGGLRNVINALWLSDHSSYLETFVRRVVREVVEKKFQVQARLPPRKMVNQAGISGAKPLKLCFLNKLPKTIYTRSNIIAEDESLLQIALFDLRTKSVVKEGPLSSLKVEICILNGEFGSDGSEEWTEDEFNSNISREREGREPLLIGERFITLENGVACIPKIAISDNSRWQRSRSFRIGVKGVPPNSNGEKIQEGRSEPVIVKDNRGECYKKHCPPSLDDELWRLKKIAKEGAIHKQFSLHGIHNVKDLLRLYITNESSVYKMLGGIRKKSWLAITEHAKTCVIDDYKLYSYHSEEHQIGLLFNSIYILVGVTFNWQNYYSPDTFTPQEKHLVEIVKQQAYKNVNNLKMIDETKLNCLTLAACLEKERQSGTTDQGLQHMDISTAQDQPVTYPGYSQPSISTSYTNEGMHDSQVYADPLPDTGEMPHNSHVLEEFSSEMYTEGDSCHFNGSCFPFLEGGYSIENESSDIQFIDGCPHYATWEPKNNILFGSCDGEEFNSYSTFINSSVDISSSGKPKAAWCKIGFVLKWVISVKRHAAAKRNAQLSYHVLPCNY* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2337 587 MobiDBLite consensus disorder prediction 1 30 - -
Pvu1g2337 587 PANTHER CALMODULIN-BINDING PROTEIN 1 576 - -
Pvu1g2337 587 Pfam Calmodulin binding protein central domain 250 315 IPR046830 -
Pvu1g2337 587 PANTHER OS02G0177800 PROTEIN 1 576 IPR012416 GO:0005516
Pvu1g2337 587 MobiDBLite consensus disorder prediction 13 28 - -
Pvu1g2337 587 Pfam Calmodulin binding protein C-terminal domain 321 381 IPR046829 -
Pvu1g2337 587 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2337 Pvu-Chr1 48770293 48773898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2337 50 581 Calmodulin-binding Proteins AT4G25800 30.651 4.54e-77 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2337 - - pvu:PHAVU_001G226000g 1192.95