Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2335 ATGGAGATGGAGAAGAGGCGTTCCAAGGGAAGCTTCCTTAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGGTTTGGAGCGATCCTGATATTTCAAAACAAGGGAAGGAAAATGTGGAGAACTTACAGAAGTCGCAGCTCACCAGGATAAAGGTGGATGAAATTGGAGCAAGTCCGAGTAACAGTCAAAGTTGTGATTTTGAGAGCACCCTTTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCTCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCATTGCCAGCTTCGGCAGTCACGGAGCCCTCCTGCACCTCATTTTACGGCTCTACATCTCATGGAGTCTCTCACTGTAATGAGGGTGCTGTTCATTCAGTGAATGAGTTTTTCCCTGCAGACTACATAAATACACTGCTTAAGCTGGAGAAGTCTCAATTGGGTGCCATGGACTCAAGGGCTAGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCATAATAAACTGCTGTCTCCTATCAAGAGTCCTGGTATTCTGCCATCAAAAAGTGCTGCCCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCAGCGGTATTTGAGGAATAGAACAGCTTCTACTAGGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTGGAAGCTGCACAATATACATCCGTGTCTGGAAAGCCTGTGAATATGAGCAAAACCTATCCTGCAAATGGCAAGCTTAGTGAGAGGAGTAGTAATTTGTCTAAATGCACTTCAGCATTCAAGGGTTCAAGAGGTTCAGAAAAAAATAGCTCTTGCCATTTAGCGAGTAAAGGAAAACCAGTTTCACTTGCAATCCAAGCCAGAAACAACGCTCATAGTAGAGATACATTGATTTCAAATGGTGATATGAAATGCATGAGACAGAAAGAGAAGAATGAGATGAAGTCAAATCAGCACTTGAGGAGCCAGAAACCAAGTACACAAAAAGCCATGCAGCAGAGACCTTGCTCAAGTCGGAATGACAATGTGCTAGGACAGAATAATCAAAAGCAGAATAGCATGACTGCCAAGTGTAAATCAACTTCAAAAATAGATTCCAATAAGCCAACAACACGAGCTCCATCTTCAGAAACTTTTGGAATAATGAAGACAACAAACAAGGGTGCTAAAACTGCCAAAATTCAGCCAAAAAGGTCAAGCACCAGGGCAACTGACATCGAAAAAGAGTTTCAAAGATCCAAAGCAGTAAGTACTTCCCGAAAGACAAAGTATATCAGCAGTGATGTTCATGAGGCTAGAGGTCCTGATAACGCAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACTACTGATGGAAGTTTTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTAAGAAGAAGTATGCCTGAGTTGTCTTCCGCTACTGAGCACGTCATCGGAACCAGAAATAGAATTGATGTAAACTCTCTTGGGCACAGTGATAGTTTTTATCCCAAAAAATTGTCATTATCTCCACAAGGGAAACATATGATAGACAGTGATGCTTTAAGTGTCCTGTTGGACAAAAAGCTACAAGAATTGACATCTAGAATTAACTTACCCCAATGTACCTTGGCTGCAGAGGGTAGTTCTTCTGGTTTGGGATCTAGTGTGCAAGACAAAGTTCCCAGTGCGGCAAGTACCATGCCTAAGGAACAAGACAGAAGCCTTTTCCCTGACCTGTTTAGTGATAAACTGGACAGCATTCTTGACTCTCGATCAAGTGATGATCCAGTGCTTAGCATGAATCAACAACTGCAGACGTCAGAAGCAAATCAAGATCCTAGCTGTAGCAGCAATAGTGAAAGTGGAAATGGTTCAGTTTGTTGGGGTTCTACTTCTGTTGCCGGTTTCGAAACTCTTGTCAGCGAAAGTTACTTGGATAGCGAAGACAGCGCTTATGCCAGCACAATTTATTCTTCAATGCAAGATGAAGAAGTCTCTAGTTTTTCCCAGATAAGCGAATCTGTATCACTTGAAAGTGAGGTGAAAGGACCAGAGAAAAGCCCTTCCACATCGGGGGACGGAAATATGACTGTCAAACAAATGAGTGGAATATCTAATTCGGTTGATTTTAAAAGGTCAAGTAACACAGAACTTGAATATGTACAGGATATTCTTGGCAATGCAGAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTACTGTAATTATGCCAAATTTATTTGATCAGTTGGAGAATCAGAATAGTATAACAGAAAACTATGGAGAAGAGTACTGTAAACTTGAAAGGAAGGCTATATTTGACTTTGTCAGCGAGTTCCTGGAGTTAAGATGCAAGCAAGCTTTCATAGGAACGTGCAAAGTGTGGCCTGGATGGATGATGTCTGTTCAGAGGAAAAGCTGGATGGCAGAGGAGCTGTACAAGGAGATGCTGAGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACAAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATACTAGCTTATTTGATTAATGAATTAGTTTCAGATTTGTTACCTGTTTAA 2736 0.413 MEMEKRRSKGSFLSLFDWNSKSRKKLVWSDPDISKQGKENVENLQKSQLTRIKVDEIGASPSNSQSCDFESTLSICSDEGCGSKAPGLVARLMGLDSLPASAVTEPSCTSFYGSTSHGVSHCNEGAVHSVNEFFPADYINTLLKLEKSQLGAMDSRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGILPSKSAAHVMEAAAKIIEASPQRYLRNRTASTRPSSVPLRILNLKERLEAAQYTSVSGKPVNMSKTYPANGKLSERSSNLSKCTSAFKGSRGSEKNSSCHLASKGKPVSLAIQARNNAHSRDTLISNGDMKCMRQKEKNEMKSNQHLRSQKPSTQKAMQQRPCSSRNDNVLGQNNQKQNSMTAKCKSTSKIDSNKPTTRAPSSETFGIMKTTNKGAKTAKIQPKRSSTRATDIEKEFQRSKAVSTSRKTKYISSDVHEARGPDNAVNNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPELSSATEHVIGTRNRIDVNSLGHSDSFYPKKLSLSPQGKHMIDSDALSVLLDKKLQELTSRINLPQCTLAAEGSSSGLGSSVQDKVPSAASTMPKEQDRSLFPDLFSDKLDSILDSRSSDDPVLSMNQQLQTSEANQDPSCSSNSESGNGSVCWGSTSVAGFETLVSESYLDSEDSAYASTIYSSMQDEEVSSFSQISESVSLESEVKGPEKSPSTSGDGNMTVKQMSGISNSVDFKRSSNTELEYVQDILGNAEFMAEEFAMGQTSTVIMPNLFDQLENQNSITENYGEEYCKLERKAIFDFVSEFLELRCKQAFIGTCKVWPGWMMSVQRKSWMAEELYKEMLSFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDILAYLINELVSDLLPV* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2335 911 MobiDBLite consensus disorder prediction 625 656 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 702 732 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 343 423 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 626 656 - -
Pvu1g2335 911 Pfam DUF761-associated sequence motif 77 102 IPR032795 -
Pvu1g2335 911 Pfam Domain of unknown function (DUF4378) 751 903 IPR025486 -
Pvu1g2335 911 PANTHER DUF4378 DOMAIN PROTEIN 1 910 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 579 603 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 579 609 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 335 438 - -
Pvu1g2335 911 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 910 - -
Pvu1g2335 911 MobiDBLite consensus disorder prediction 424 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2335 Pvu-Chr1 48751762 48756274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2335 3 909 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.902 3.79e-108 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2335 - - gmx:102663635 1425.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2335 1 48751762 48756274 Pvu7g2061 7 43981728 43985722 ECH
Pvu1g2335 1 48751762 48756274 Pvu1g2335 1 48751762 48756274 ECH
Pvu1g2335 1 48751762 48756274 Pvu7g2061 7 43981728 43985722 PCT