Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2327 ATGGTTTGCGAGGAAGAGTTGCTGATTGAAAAAGTGTGCGGGCTGTATGAACAAATCTCGAGCCTGGAGAGTCTGAAACCTTGCAAGAATGTCGACATGCTTTTCACCCAACTAGTCCTCACATGCATACCTCCAAGCCCAATAGATGTCACAAACCTAAACAAAAACGTGCAAGAGATTAGATCTCATCTTATAAAACTCTGTGGTGAAGCTGAGGGTCATTTAGAGACCCACTACTCAACCCTCCTAGCCTCGTACGACAACCCCATTGAAAACCTTGATATTTTTCCTTATTATTCAAACTACCTCAAACTTGGTCTCCTTGAGTTCACTATCCTCACCCAACACTGCACCCATGTCCCTACCAAAATCGCCTTCGTGGGTTCTGGACCCCTTCCTCTCACCTCAATTGTGTTGGCATCAAACCACTTACCTTCCACCACATTCCACAACTATGACATGGACTCCTTGGCCAATTCCAATGCTACGCGCTTGGTTTCCTCTCACCCTGACTTGTCCAACCGCATGCTTTTTCACACCGCAGACATCTTGGATGTCTCCAACGCTTTGAAGGAGTACGAGGTTGTCTACTTGGCAGCACTTGTGGGCATGGACAAGGAGGGCAAAAACCGGATCATCGATCACTTGGCCAAGCACATGAACCCTGGAGCATTTCTCATGCTCAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTCGTTGACCCTTGCGATCTTCGAGGCTTTGAGGTCCTCTCTGTGTTCCACCCCACCGATGAGGTCATCAACTCGGTTGTCATAGCACGTAAATATCCCCTTCCTATGCACTCACTCGATCAAGGCCTTGCTTCCAAGATCCTTCCCAACAAATGCTCCGAGATTCAACCCTTCAACCCCCTCAACCATGGGAACATCATTGAGGAATTGGCCATTGAGGAGCAACTCTTGTGA 954 0.4832 MVCEEELLIEKVCGLYEQISSLESLKPCKNVDMLFTQLVLTCIPPSPIDVTNLNKNVQEIRSHLIKLCGEAEGHLETHYSTLLASYDNPIENLDIFPYYSNYLKLGLLEFTILTQHCTHVPTKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDSLANSNATRLVSSHPDLSNRMLFHTADILDVSNALKEYEVVYLAALVGMDKEGKNRIIDHLAKHMNPGAFLMLRSAHGARAFLYPVVDPCDLRGFEVLSVFHPTDEVINSVVIARKYPLPMHSLDQGLASKILPNKCSEIQPFNPLNHGNIIEELAIEEQLL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2327 317 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Pvu1g2327 317 PANTHER NICOTIANAMINE SYNTHASE 3 1 316 IPR004298 GO:0030410|GO:0030418
Pvu1g2327 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Pvu1g2327 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Pvu1g2327 317 PANTHER SYNTHASE, PUTATIVE-RELATED 1 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2327 Pvu-Chr1 48680148 48681916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2327 1 313 Nicotianamine Synthase Gene Family AT5G04950 59.062 5.83e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2327 K05953 - gmx:100794250 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2327 1 48680148 48681916 Pvu1g2327 1 48680148 48681916 ECH