Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2298 ATGGGCGGAGATGGAGCGACGGCGAACGCGGAGGCGCAGTACGCCACGGCGAAGATATCGGTGTGGTGGGACATCGAAAACTGCCATGTGCCCAAGGGTTCGGATCCGCACGCGATCGCGCAGAACATCAGCTCAGCGCTGGTCCGCATGAACTACTGTGGCCCCGTCTCCATCTCCGCCTACGGAGACACCACCACGCGCATCCCAGCCTCTGTACAGCACGCGCTCTCCAGCACCGGAATTGCCCTCAACCACGTCCCTGCCGGCGTGAAAGACGCAAGTGACAAGAAGATTCTTGTTGATATGCTATTCTGGGCAGTGGACAATCCCGCACCCGCCAATTATTTATTAATTTCGGGTGACCGAGACTTCTCAAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCGCAACCTCATAAGGCATCAGCACCCTTGGTCGCTGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTGTCTAATGGTGAATCACAACAACTTGGTAATGGTAGCATTAGCCATGTATCATCTTCTGACTCCTCACTAATTCCAGCTACAAGTGCTGCTCAGATGCAGCAATCCTATTCAGAAGTTCATGTAGGAAATTCAAAATTTCCAAATGGAGGCAGGGGATTCGACACTAGGTTTCAGGGTAAACCTAATTGGAGAAACTCGAGTCAATCAAATGCACCCAGAGCAATGAATCCACCACCACCACCACCTGGACTTCAAGATAATCGTAATCGTAATAATATAAACTCTTATCGACCTGGAAACTTTAATCCAAATGTTCCGCTGAGTGGATCTGCTACAAATTATGTTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAGTTCCTTATTCCCAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATACTCCAACTTCTCGTACTTTTGCAAGTCCAATGATCCCACCTAGTAGGACTGGTGGTCCCAATTTCAACTCTGGGCCACATACCAACGTGCCAGATATTGGTAATCTGAACATTTCGGGATATCCTGATAGTGTTCATAACCCACCTACTATTCAACAACGGAATGGAGATTTGAAACATAATCCTAATAGTAGTGCTCCACTTTTAAGATCAATTGATGAAAAAAATGGACATGTGGTACATAACAGTGGCACACAACAATTACACCAAGGTTATCAACATGGTCCAGATTATCAACCAACGCCGTTGGCAGCAATGGGTAATAATAATCCTCCTGGTAGTGGTATGTGGGGTTCTCCAGGATGTCCTAAGCCTTCTGAATATGTACAAGGCTTAATAGGGGTTGTTTTACTTGCCTTGAACTCGCTAAAAAACGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGATTTGGAGATTCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTCGTGAAACAGAATTTAGGTGCTTTGCCATTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCGTCAATCCATTAGGTGGTAATCCTAAGCAGCACTCAAAAGAAACATGGGATCAAATTGAAAAGTTTTTAACAACTCCTGCTGGAAGAACAGCAATAATGGCTACACTGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTCAAAGATCTTGCTTTGGGTGATGTCCTTCAGATTCTCAACATGTTAATTACCCATAAAAAATGGATTGCGCATCATCCGTCTGGTTGGCAACCACTTAACATTGCTCTTCCTGAGACAAACCCCGGTTCAGGGGTTGTAGCTGAAGTATAA 1899 0.4487 MGGDGATANAEAQYATAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTTRIPASVQHALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPHKASAPLVAAAKSVWLWTSLLAGGPPLSNGESQQLGNGSISHVSSSDSSLIPATSAAQMQQSYSEVHVGNSKFPNGGRGFDTRFQGKPNWRNSSQSNAPRAMNPPPPPPGLQDNRNRNNINSYRPGNFNPNVPLSGSATNYVHGNTDQLWSNNSNLQGNHQVPYSQPLRPNNFPLQPPFAPSNSYTPTSRTFASPMIPPSRTGGPNFNSGPHTNVPDIGNLNISGYPDSVHNPPTIQQRNGDLKHNPNSSAPLLRSIDEKNGHVVHNSGTQQLHQGYQHGPDYQPTPLAAMGNNNPPGSGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRFGDSKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQHSKETWDQIEKFLTTPAGRTAIMATLCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIAHHPSGWQPLNIALPETNPGSGVVAEV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2298 632 MobiDBLite consensus disorder prediction 171 212 - -
Pvu1g2298 632 PANTHER LIMKAIN B LKAP 2 617 IPR024768 GO:0005777|GO:0010468|GO:1903231
Pvu1g2298 632 MobiDBLite consensus disorder prediction 416 447 - -
Pvu1g2298 632 MobiDBLite consensus disorder prediction 171 270 - -
Pvu1g2298 632 CDD PIN_limkain_b1_N_like 18 143 - -
Pvu1g2298 632 MobiDBLite consensus disorder prediction 256 270 - -
Pvu1g2298 632 Pfam NYN domain 18 155 IPR021139 GO:0004540
Pvu1g2298 632 MobiDBLite consensus disorder prediction 374 397 - -
Pvu1g2298 632 MobiDBLite consensus disorder prediction 328 356 - -
Pvu1g2298 632 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 617 - -
Pvu1g2298 632 Pfam OST-HTH Associated domain 570 617 IPR025677 -
Pvu1g2298 632 Gene3D - 9 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2298 Pvu-Chr1 48464514 48469318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2298 8 201 C2H2 Transcription Factor Family AT5G61190 70.619 3.86e-84 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2298 - - gmx:100794608 1149.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2298 1 48464514 48469318 Pvu1g2298 1 48464514 48469318 ECH