Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2292 ATGGCCGATGGAAGCACAGCTACCTGCATCGATATTCTCCTTGCCATCATCCTCCCTCCTCTCGGTGTTTTTCTCAAGCATGGCTGCAAGGTAGAGTTCTGGATCTGTTTGCTGCTCACCATTCTTGGCTACATTCCTGGAATTATCTATGCTGTCTATGCCATCACCAAGTGA 174 0.4828 MADGSTATCIDILLAIILPPLGVFLKHGCKVEFWICLLLTILGYIPGIIYAVYAITK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2292 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Pvu1g2292 57 PANTHER BNAC03G34420D PROTEIN 3 57 - -
Pvu1g2292 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Pvu1g2292 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 57 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2292 Pvu-Chr1 48408778 48409886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2292 5 57 RCI2 Gene Family AT3G05890 77.358 1.71e-25 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2292 - - cit:102622068 107.842