Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2289 ATGGCGAGAGTTTTCTGGACTGTCATTGCTATAGCACTTGTTTTCAGCAACTGGGTTGATGGGTTCGGAGGTTATTATGAACATCAGTTGAATGAAACAGAGTTGTCTTTATTGGAGGCTCATGAAGCTTCCTTATCCTACGCCGGGAGTAATCTTCTGCTGGTAGGACTCACCCTTGTCCAAAATGCTGCTGCTAAAGGAGCAGTTTGCTTGGATGGAACATTACCTGGTTATCATTTGCATCGAGGATATGGATCAGGATCAAATAGGTGGCTTATTAATTTAGAGGGTGGTGGATGGTGTAATAATATTAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAAGAGATCCCTTTTACTGGAATATTGAGTAACAAGGCCGAAGAAAATCCAGATTTTTTCAATTGGAATAGAATAAAGCTTCGTTATTGTGACGGTGCTTCATTTGCTGGGGATAGTGAAGATGAGACTGCTGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCTATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCGATCAGGCTCTTCTTTCGGGATGCTCCGCGGGTGGCCTGGCTACTATTATTCATTGTGATGAATTTCGTGGTCTCTTTCCAATGACCACAAGAGTGAAATGTCTAAGTGATGCTGGGTTGTTTCTTGATGCGATTGACGTATCTGGTGGACGTACCCTCAGGAATTTATATGGCGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTGCCACAAATTTGTACTAATCACCTTGATCCCATCTCGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAAGACCCCGCTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCTGCAGATCCGCATGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCACCACAAATCCAATATCTGCAAGGATTCCGGAATCACATGCTGAATGTTATCAAAGACTTCGCAAGAGCAAACCAAAATGGTTTGTTTATTAATTCATGTTTTTCTCACTGCCAAACTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTTATTAAGAACAAGGGTATCGCTGTGGCTGTTGGAGATTGGTATTTCGATCGAGCAGGTGTTAAGGTCATTGATTGTCCTTACCCTTGTGACAATACGTGCCATCATCTCATTTTCAGATGA 1257 0.4264 MARVFWTVIAIALVFSNWVDGFGGYYEHQLNETELSLLEAHEASLSYAGSNLLLVGLTLVQNAAAKGAVCLDGTLPGYHLHRGYGSGSNRWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFFNWNRIKLRYCDGASFAGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFADQALLSGCSAGGLATIIHCDEFRGLFPMTTRVKCLSDAGLFLDAIDVSGGRTLRNLYGGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHDCRLNHAKCTAPQIQYLQGFRNHMLNVIKDFARANQNGLFINSCFSHCQTERQDTWFADNSPVIKNKGIAVAVGDWYFDRAGVKVIDCPYPCDNTCHHLIFR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2289 418 Pfam Pectinacetylesterase 53 397 IPR004963 GO:0016787
Pvu1g2289 418 PANTHER PECTIN ACETYLESTERASE 4 417 - -
Pvu1g2289 418 PANTHER NOTUM-RELATED 4 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2289 Pvu-Chr1 48376243 48380225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2289 47 418 Carbohydrate Esterase AT1G57590 74.462 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2289 K19882 - gmx:100782401 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2289 1 48376243 48380225 Pvu7g2141 7 44683702 44690967 ECH
Pvu1g2289 1 48376243 48380225 Pvu1g2289 1 48376243 48380225 ECH
Pvu7g2141 7 44683702 44690967 Pvu1g2289 1 48376243 48380225 ECH
Pvu3g1294 3 30522226 30529245 Pvu1g2289 1 48376243 48380225 ECH
Pvu1g2289 1 48376243 48380225 Pvu7g2122 7 44535436 44540434 PCT