Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2270 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAGAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGCCACTCTTTCTGTTATGTGAGGCCTTCTATTTTTGAATCTCCTGCCATTACCCCGTCAAACTCTGAGAGGTTCACTGTTGATTCTAGCACCCTTGATTCCGAGACATTGAGTGGCTCATTTAGGCATGAGAGCATTGAAGAGAGGCCTGGCAAGAATGTTTCGGAAACCACATTCAAGACAATATCGGGTGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCTCTACTTGCTAGTGATGTTCTAGAGCCTGCAGCATCCTTTGAGGGAACCTCGTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGTTCTGGACCTTTGAATGGATTCATGTCGGGACCATTGGAGAGATTTGCTTCCGGTCCATTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTGATGTCAGGACCTCTTGATGCCACTGACAAGTCCAACTTCTCAGCCCCTCTTGCACGTGGTCGCCGAAGGCCACACCTCCAGCGCCTCATGAGAAGTGTGAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCCAAGCACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCGAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGTTGGATCGTCCGAATTGGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCCGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTTAAATCTGAAGTCCTTAATAATGGAAATGATGTAGTTGCTCTAGAATGCGGTAGGGAGGAAATGCCTGATGGTCATAACATTTCAACTGAAGAAAGTTCTTGCTGTACAGAAACTTCTTGTCCCATAATGGTCAAGGATCAGTCGTCTAATAGTGAGATAGTGGAGGTAAATGCTGAAATTAAGGTAAATGTTGAAAAGAAAAATTGTGGAAGTCCCAGTATTGACCATCCTGCTCCTGTATCTGTTCCAATTGGACAATTGAGTGGACAGGGCAGAAGAAGTTTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAAGTGTCAGAACAAGGCAAGGATTCTATAGTTCCTGCTGAAATAACACAAGAAAGGAAGTTGAGGTTCTGCTCATCTGAAGGTAAAGAGGATAGATCTGGACACCAGGATGAATGTCCTACTACTTCAGGGGAAAATGGAGGCCCTGAGTTTAGTTCGACTAACCTAGAGCCTATAGCTCCCTTTTCTGTTTCAGGACAAAGGCAGAGTACTAGAAAGTCATTTATTGGTTCAAAAATCAGAAAAATGTACAGGAAACAGAAGTCCTTACGAAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTTTTGACAAGAAATTAGTGGAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGGGCTCTTGAAAGAACAGAAGAGGCATACTTGAAAATGGTGGAGAATAATATGGATAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTCTATGTTATGAACCTAGGAGATAGTCGTGCCATTTTGGCTCAAGAACGACCAAATGATCGTCATCCTAATCTGTGTCTCGTCAAAGATGACATGAGGCATAGAAATCGTTCTAGAGAGTCATTAGTAGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAATATAAACAAGCATGTTAACAAGATAAACAAAAATCGAGAGATTTCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCTACAGATCACAGCACAAGTATAGAAGAGGAAGTGTTTAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATGTTTTAACGAACCTCTACTGAAGATGTTTCGAGTTGATTATGTGGGCAATGGTTCTTACCTAAGTTGTGCTTCGTCTGTGGTTCACCACCGGCTTTCTTCAAGCGATCGGTTCCTGGTGCTGTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAGGAGGTAGTTGCCCATGTCACCTGGTTCATGGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTTATAGCAGAGCTTCTCTTCCGTGCCGCAAAAAAAAATGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATCGCCGAAAATATCATGATGATGTTTCTCTTATGGTCGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2664 0.4347 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVSETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSKHSMGVSWVQRLFLHPVSQLAWNSKEAKFRSEVSRNCTEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKSEVLNNGNDVVALECGREEMPDGHNISTEESSCCTETSCPIMVKDQSSNSEIVEVNAEIKVNVEKKNCGSPSIDHPAPVSVPIGQLSGQGRRSLRLYELLQMESWNEQVSEQGKDSIVPAEITQERKLRFCSSEGKEDRSGHQDECPTTSGENGGPEFSSTNLEPIAPFSVSGQRQSTRKSFIGSKIRKMYRKQKSLRKKLFPWSYDWHREETCFDKKLVESSGPIRICKSGVDHNAVLRAMARALERTEEAYLKMVENNMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNLCLVKDDMRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPCFNEPLLKMFRVDYVGNGSYLSCASSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSLMVVSLEGRIWRSSG* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2270 887 MobiDBLite consensus disorder prediction 477 523 - -
Pvu1g2270 887 MobiDBLite consensus disorder prediction 477 491 - -
Pvu1g2270 887 MobiDBLite consensus disorder prediction 492 523 - -
Pvu1g2270 887 Gene3D - 245 413 IPR036457 -
Pvu1g2270 887 Gene3D - 515 884 IPR036457 -
Pvu1g2270 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Pvu1g2270 887 PANTHER PROTEIN PHOSPHATASE 2C 11 887 IPR015655 GO:0004722|GO:0006470
Pvu1g2270 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
Pvu1g2270 887 SMART PP2C_4 271 876 IPR001932 -
Pvu1g2270 887 CDD PP2Cc 584 878 IPR001932 -
Pvu1g2270 887 PANTHER PROTEIN PHOSPHATASE 2C 32 11 887 - -
Pvu1g2270 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Pvu1g2270 887 Pfam Protein phosphatase 2C 598 647 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2270 Pvu-Chr1 48206175 48211710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2270 1 887 PP2C-type Phosphatase Gene Family AT2G46920 63.677 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2270 - - gmx:100786856 1675.99