Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2267 ATGAGAATGAAGGTGCTTCTTCTAATAGCATTTACCTTTGTTTCTGTGGCTATCAACGTTAGATCTGATCATGAGCTTTTCTACCAAAACGATGCCGCTTCAATGGCTGCGAATCCTCTCTTGGTCCCTCTCACTCTTATTCCGGGAGCTGCTTCCAAAGGAGCTGTTTGTTTGGATGGAACGTTGCCTGGTTATCACTTTCATCCTGGATTTGGATCTGGGGCAAATAGTTGGGTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTCAGAAAAACTACTCGTCGTGGTTCCTCAAAATTCATGGAAAAGCAACTACCATTCACAGGGATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTATTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAGACGAGGCTGCACAGCTTCAATTCCGAGGACAAAAAATCTGGCAAGCTGCAATGGAAGAATTAATGTCAAAGGGAATGAAGCAGGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCTGGTGGTTTAGCATCTATAATACATTGTGATGAGTTCCGGACCTTGTTTCCTACATCTACCAAAGTGAAATGTTTGAGCGATGCAGGGCTTTTCCTAGATGCGGTTGATGTTTCTGGGGTCCGCACATTGAGGAATCTGTTTGGAGGTGTAGTTAAGTTACAGGAAGTGCAAAAAAATCTGCCAAAAAGTTGTCTCAACCAATTGGACCCAACTTCGTGCTTTTTTCCTCAAAATTTGGTCAACCATGTTGAGACTCCATTGTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGTCCCTTCTTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAACATAATCGTGCAAACTGTAACTCATCTCAAATTCTGTTCTTCCAAGACTTCAGAAATCAAATGCTAAACTACATCAAAGGCTTCTCAGGGGAATCTCAAACTGGGTTATTCATCAATTCTTGTTTTGCCCATTGCCAGACTGAGCTACAAGATACTTGGTTTGCTGATGACTCTCCAGTTATTGGCCACACGCCAATTGCAATTGCTGTTGGAGACTGGTATTTCGATCGGAAAACCGTCAAAGCTATAGACTGCGCTTACCCGTGTGACAAAACCTGCCATGATCTGGGCTTCAAAGCTGGTAGATCTACTGTGGTGGACTACCAGTCCCCAAGTGGTGATGACACATCTACCACAACCATGACATATTCTAGCTCCACGAGGCTGACTTATAGTGCTGGCTTATATATGCTAAGTATTCTGTCGTTAATTACTCACTCCTAG 1362 0.4339 MRMKVLLLIAFTFVSVAINVRSDHELFYQNDAASMAANPLLVPLTLIPGAASKGAVCLDGTLPGYHFHPGFGSGANSWVIQLEGGGWCNTIRSCVFRKTTRRGSSKFMEKQLPFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQDEAAQLQFRGQKIWQAAMEELMSKGMKQANQALLSGCSAGGLASIIHCDEFRTLFPTSTKVKCLSDAGLFLDAVDVSGVRTLRNLFGGVVKLQEVQKNLPKSCLNQLDPTSCFFPQNLVNHVETPLFLLNAAYDAWQVQESLVPSSADPHGSWNDCKHNRANCNSSQILFFQDFRNQMLNYIKGFSGESQTGLFINSCFAHCQTELQDTWFADDSPVIGHTPIAIAVGDWYFDRKTVKAIDCAYPCDKTCHDLGFKAGRSTVVDYQSPSGDDTSTTTMTYSSSTRLTYSAGLYMLSILSLITHS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2267 453 Pfam Pectinacetylesterase 36 385 IPR004963 GO:0016787
Pvu1g2267 453 PANTHER PECTIN ACETYLESTERASE 4 420 - -
Pvu1g2267 453 PANTHER NOTUM-RELATED 4 420 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2267 Pvu-Chr1 48179963 48185922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2267 29 405 Carbohydrate Esterase AT1G57590 70.557 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2267 K19882 - gmx:100785270 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2267 1 48179963 48185922 Pvu7g2141 7 44683702 44690967 PCT