Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2255 ATGTCTGATAAGATGAAGCATGGGAATGACTTGCCTGATGAAGAGCTTAAACATGATGAGAGAAGGGCGCCAGAGAGCACAACAAACGGGGAAAAGAAAGAAAAGAGACAACAAAAAGAAAAGGTTGAAAGGGTTCCATATCACAGGCTGTTCTTATTTGCAGACTCCACTGACATCATTTTAATGGTTGTTGGCACCATTGGAGCCATTGGAAATGGCCTTGGGATGCCTCTCATGACATTTATTTTTGGGGAACTCATTGATACCTTTGGCAAAAACCAATTTGGCTCCAACGTTGTCAAACAAGTTTCCAAAGTCTGCCTGAAATTTGTGTACTTAGGAATAGGCACTGGAGTGGCTGCTTTCCTCCAGGTGACTTGCTGGATGGTCACAGGGGAAAGACAGGCTGCAAGAATTAGAGGCTTGTATTTGAAAACTATACTAAGACAGGATATTGCTTTCTTTGATAAGGAAACTAACAGTGGAGAGGTGATAGGGAGGATGTCTGGTGACACTGTTCTCATACAAGATGCTATGGGTGAGAAGGTTGGGAGATTTCTGCAGCTAACAGCAACCTTTTTTGGGGGCTTTGTGATTGCATTTATCAAAGGATGGCTTCTAACTGTTGTCATGTTATCCGTTGTTCCACTTGTTGCTACTGCTGGCGCTGCTATGGCCCTTATCATAGGAATGATGGCAAGCCGAGGCCAAACAGCTTATGCGAAAGCTTCACATGTAGTTGAAGAAACAATAGGCTCAATAAGAACTGTTGCATCCTTTACAGGGGAAAAGCAAGCAGTGTCCACTTACAAGAAATTTCTTGCAGATGCTTATAAATCAGGAGTTCATGAAGGTTTAGTAGGTGGAATGGGTTTTGGGCTAGTTTTGTTCGTTATGTTCTGCGGTTATGCTTTGTCTGTATGGTTTGGCGCAAAGATGATAATTGAAAGAGGATATGGTCCAGGTGCGGTGGTCAATGTGTTTGTTGCTGTGTTAAATGCTTCCATGTCTCTTGGCCAGGCATCTCCTTCCATGAGTGCTTTTGCGCAAGGTCAAGCGGCAGCTTATAAAATGTTTCAGACAATTGAGAGAAAACCAGAGATAGATGCTTATGACCCAAATGGAAAAAACCTAGAGGACATTCACGGTGAAATCCATTTAAGGGATGTTTATTTCAGCTATCCAGCCAGACCCGAGGAGTTGATATTCAGTGGATTCTCTCTTCATATAGATAGTGGCACCACTGCAGCTTTGGTAGGACAAAGCGGAAGTGGGAAGTCTACAGTTATCAGTTTAATCGAAAGATTCTATGATCCACAGGCTGGTGAAGTTCTTATCGATGGCACTAATGTGAAAGAATTTCAGCTTAGGTGGATCAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCAGTGTTACTTGCAGCTAGCATTAAGGATAATATTGCGTATGGAAAAGATGGAGTAACAGTTGAAGAGATAAGAGGTGCAGCTGAGCTTGCAAATGCTGCTAAATTCATTGACAAACTGCCACGGGGATTAGACACAATGGTTGGTCAGCATGGAACTCAACTATCCGGTGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATCTTGAAAGATCCAAGAATTTTACTTTTAGATGAAGCAACAAGTGCACTTGATGCAGAGTCAGAAATAATAGTGCAAGAAGCTCTAGACAGGATCATGGTCAATAGAACTACTGTCATTGTCGCACATCGCCTGAGCACGGTGAGAAATGCCGATATGATTGCAGTAATTCATAGAGGAAAAGTGGTTGAGAAAGGAAGACACGTAGAATTAACCAAGGATCCTGAGGGAGCATACTCTCAACTTATACGTTTACAAGAAGGAAACCAGGGATCAGAAGAAACAAGAGACAGCCAAAGCAAGAGGGAACTTTCCTCAGAATCCTTTAGAAAGTTGAGTCAAAGGCTGTCATTTCGAAAATCAGGATCATCTGTGGGGAACAGTAGCCGTCACTCTCTTTCAGTTTCATTTGGTTTGCCTACAGCAATTAGCATCCCTGATCCTGACCTTGAAAACTCACAGCCTCAAGAAAAATCGCCAGAAATTTCATTCCGGCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTGCTCCTGATTGGATGTGTAGCTGCCATAGCAAATGGTGTTATATATCCAATATTTGGTGTATTGCTCTCCAGAATTATCAAAACATTTTTTAAACCATTTCCTGAGATGAAAAAGGATTCCAAGTTTTGGGCACTCATGTTTGTGATCCTTGCAATTGGATCTTTAATAGCAGTTCCAGTCAGAAGTTACTTTTTCTCTGTGGCAGGCAGTAAGTTAATCCGACGAATCAGGCTCATTTGTTTTGAGAAGGTGGTCAACATGGAGGTTGGGTGGTTTGATGAGCCTGAGCACTCTAGTGGTGCCATTGGTGCAAGGCTCTCAGCAGATGCAGCATCAGTGCGTGCCCTTGTTGGTGATGCTCTAGGACTAATTGTTCAAAATATAGCAACAGCATTGACAGGTTTGATTATTGCTTTTGTTGCGAGCTGGCAATTGGCGTTTATTGTTCTTGTTTTGGTTCCCCTTATTGGAATGAATGGCTATATCCAAATGAAATTCATGAAGGGATCCAGCACAGATGCAAAGACGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTCTGTGCAGAGGAGAAAGTTATGGAACTATACAGGAAAAAATGTGAAGGTCCCATGAAAGCAGGGATTCGACAAGGATTGATAAGTGGAACAGGATATGGTCTTTCATTTTTCTTGCTCTTCACTGTCTATGCAGTCAATTTTTATGCCGGAGCCAGACTTGTGGAAGCTGGCAAGGCATCAATCTCAGATGTTTTTTTGGTTTTCTTTGCTTTAACTATGGCATCTGTTGGAATTTCCCAATCAAGCTCCCTTGTTCCTGATTCTAACAAAGCCAAGATAGCGACTGCTTCAATATTTAGAATAATTGATAGGAAATCGAAGATAGACCCTAGTGATGAGGTCGGTAACACACTGGATAGTGTAAAAGGAGAAATACAGATTTGTCATGTAAGCTTTAAGTATCCATCAAGGCCAGATATACAAATTTTTCGAGACTTAAGCTTGACAATCCATTCAGGCAAGACTGTGGCCCTTGTTGGTGAAAGTGGGAGTGGAAAATCCACAGTGATTGCCTTGTTACAGAGATTTTATGATCCTGATTCTGGTGAAATTACAATTGATGGGGTGGAAATTCAGAATTTAAAACTCAAGTGGTTAAGGCAGCAGATGGGACTTGTAAGCCAAGAGCCAGTCTTGTTCAATGATACCATCCGTGCCAATATTGCATATGGAAAGGAAGGCAATGCTAATGAAGCAGAAGTCATAACCGCAGCCAAACTGGCCAATGCACATGGCTTTATTGGTGGCTTACAACAGGGTTATGATACAGTAGTGGGAGAAAGGGGAGTCCAACTATCTGGTGGGCAAAAGCAAAGGGTGGCCATTGCACGTGCTATGATTAAAAGTCCACAGATATTGCTACTTGACGAGGCCACAAGTGCACTAGACGCTGAGTCAGAGAGAGTTGTTCAAGATGCCTTAGATAAAGTGATGGTGAGCAGGACCACTGTGGTGGTGGCTCATCGTTTATCTACAATAAAAAATGCAGATGTGATTGCAGTGGTAAAAAATGGCGTTATAGTGGAGAAAGGTAGGCATGAGACACTCGTTAACATCAAGGATGGATTTTATGCTTCCTTGGTCCAACTTCATACAAGTTCAACAACACCATGA 3849 0.425 MSDKMKHGNDLPDEELKHDERRAPESTTNGEKKEKRQQKEKVERVPYHRLFLFADSTDIILMVVGTIGAIGNGLGMPLMTFIFGELIDTFGKNQFGSNVVKQVSKVCLKFVYLGIGTGVAAFLQVTCWMVTGERQAARIRGLYLKTILRQDIAFFDKETNSGEVIGRMSGDTVLIQDAMGEKVGRFLQLTATFFGGFVIAFIKGWLLTVVMLSVVPLVATAGAAMALIIGMMASRGQTAYAKASHVVEETIGSIRTVASFTGEKQAVSTYKKFLADAYKSGVHEGLVGGMGFGLVLFVMFCGYALSVWFGAKMIIERGYGPGAVVNVFVAVLNASMSLGQASPSMSAFAQGQAAAYKMFQTIERKPEIDAYDPNGKNLEDIHGEIHLRDVYFSYPARPEELIFSGFSLHIDSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNVKEFQLRWIRGKIGLVSQEPVLLAASIKDNIAYGKDGVTVEEIRGAAELANAAKFIDKLPRGLDTMVGQHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEIIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKVVEKGRHVELTKDPEGAYSQLIRLQEGNQGSEETRDSQSKRELSSESFRKLSQRLSFRKSGSSVGNSSRHSLSVSFGLPTAISIPDPDLENSQPQEKSPEISFRRLASLNKPEIPVLLIGCVAAIANGVIYPIFGVLLSRIIKTFFKPFPEMKKDSKFWALMFVILAIGSLIAVPVRSYFFSVAGSKLIRRIRLICFEKVVNMEVGWFDEPEHSSGAIGARLSADAASVRALVGDALGLIVQNIATALTGLIIAFVASWQLAFIVLVLVPLIGMNGYIQMKFMKGSSTDAKTMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMKAGIRQGLISGTGYGLSFFLLFTVYAVNFYAGARLVEAGKASISDVFLVFFALTMASVGISQSSSLVPDSNKAKIATASIFRIIDRKSKIDPSDEVGNTLDSVKGEIQICHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITIDGVEIQNLKLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGNANEAEVITAAKLANAHGFIGGLQQGYDTVVGERGVQLSGGQKQRVAIARAMIKSPQILLLDEATSALDAESERVVQDALDKVMVSRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLVNIKDGFYASLVQLHTSSTTP* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2255 1282 CDD ABC_MTABC3_MDL1_MDL2 385 623 - -
Pvu1g2255 1282 ProSitePatterns ABC transporters family signature. 1177 1191 IPR017871 GO:0005524
Pvu1g2255 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 62 358 - -
Pvu1g2255 1282 SMART AAA_5 1064 1257 IPR003593 -
Pvu1g2255 1282 SMART AAA_5 412 604 IPR003593 -
Pvu1g2255 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 705 1020 - -
Pvu1g2255 1282 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 25 1278 - -
Pvu1g2255 1282 MobiDBLite consensus disorder prediction 1 41 - -
Pvu1g2255 1282 MobiDBLite consensus disorder prediction 624 644 - -
Pvu1g2255 1282 Pfam ABC transporter transmembrane region 63 336 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g2255 1282 Pfam ABC transporter transmembrane region 715 987 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g2255 1282 Gene3D ABC transporter type 1, transmembrane domain 107 1011 IPR036640 GO:0005524|GO:0016021
Pvu1g2255 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1031 1275 IPR027417 -
Pvu1g2255 1282 Gene3D - 1027 1281 IPR027417 -
Pvu1g2255 1282 PANTHER - 25 1278 - -
Pvu1g2255 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 621 IPR003439 GO:0005524
Pvu1g2255 1282 Gene3D - 383 640 IPR027417 -
Pvu1g2255 1282 MobiDBLite consensus disorder prediction 627 644 - -
Pvu1g2255 1282 SUPERFAMILY ABC transporter transmembrane region 44 369 IPR036640 GO:0005524|GO:0016021
Pvu1g2255 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 623 IPR027417 -
Pvu1g2255 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 716 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g2255 1282 CDD ABC_MTABC3_MDL1_MDL2 1037 1275 - -
Pvu1g2255 1282 SUPERFAMILY ABC transporter transmembrane region 697 1021 IPR036640 GO:0005524|GO:0016021
Pvu1g2255 1282 ProSitePatterns ABC transporters family signature. 524 538 IPR017871 GO:0005524
Pvu1g2255 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1037 1274 IPR003439 GO:0005524
Pvu1g2255 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 63 350 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu1g2255 1282 Pfam ABC transporter 1056 1205 IPR003439 GO:0005524
Pvu1g2255 1282 Pfam ABC transporter 405 552 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2255 Pvu-Chr1 48068660 48075616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2255 38 1281 Calmodulin-binding Proteins AT2G36910 43.780 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2255 K05658 - gmx:100802547 2196.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2255 1 48068660 48075616 Pvu7g2155 7 44828291 44833761 PCT