Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2254 ATGGCATTGTCTGTCATAAGAACAAAAGGAGGCCTAGTTAAGCCAGGCAAGGAGACTCCCTTGACCACACTAGACTTATCAGTGATTGATAGGTTACCTGTTCTAAGATGCAACGCTAGAACCTTGCATGTCTTCAAACACGGTCCTCAAGCAACAAGAGTAATAAGAGAGGCCCTCTCCAAAGCACTCGTTCCATATTACCCTCTTGCAGGAAGACTTCGAGAATCGCAACCAGGGTGCCTTCAAATTCAGTGCACAGGTGATGGCGTGTGGTATGTTGAGGCATCTTCTCATTGCACCCTTCAATCTCTTCATTTCTTTGATGATGTTCAGTCTATTCCTTATGATGATCTTCTTCCTGATGCTATTCCCGAGAGCCAAGGTATCGACCCCCTCGTGCAGATGCAGGTGACACAATTCGGTTGCGGAGGGTTTGTGATAGGCCTCATATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAATAGGGGAACTAGCTAGGGGTCTGGAGAAACCTACCACCGAACCAGTGTGGCACAGGAACTTCTTTCCATCTTCTCAAACCCCTCAAGAAACTGCATTGCCACCAATACCACTCGCTCCTCCTCAAATGCCAGAATACAAACTAGAGCATGCTAACATAGACATGCCCGTGGATCAAATCAACCGTCTGAAGAGAGAATTTCAACAAGTGACTGGACTCAAATGCTCAACCTTCGAGATTGTAGCAGCAACATGTTGGAGCAATCGAACAAGGGCAGTTGAATTCGAGCCCAATACGGAATTGAAGCTAGTGTTCTTCGCAAATTGCCGTCAACTGATGAACCCAGCTCTGCCCAATGGCTTCTACGGCAATTGTTTCTTCCCAGTGACGATCACGGCTTCGTGTGAGTCACTTAGAAATGCAACAACGGTTGGTGTGGTGAAGCTGATACAGGAAGCGAAGGGGAAGTTAGGCGTGGAATTTGACAGGTACCTGAAGGGTGAGCATTTCAAAAATGGAGAAGACCCTTTTGCGCCTCCACTCACCTACACCACTCTCTTCGTATCTGAGTGGGGGAGGCTGGGATTCAACCACGTGGACTACCAGTGGGGGCCACCCGTCCACGTGGTTCCCATCCAAGGGTCTAGCATTATACCAGTGGCCATTGTGGGGTCAATGCCTCTTCCCAACAAAGGGATTCGTTTGATGACGTGGTGTGTGGAGGAGCCACATCGCCTTCCTTTCCTTCATCAGATGCATGGGGCCATCAATCAGGAACTCAGTATGTAA 1290 0.4853 MALSVIRTKGGLVKPGKETPLTTLDLSVIDRLPVLRCNARTLHVFKHGPQATRVIREALSKALVPYYPLAGRLRESQPGCLQIQCTGDGVWYVEASSHCTLQSLHFFDDVQSIPYDDLLPDAIPESQGIDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAIGELARGLEKPTTEPVWHRNFFPSSQTPQETALPPIPLAPPQMPEYKLEHANIDMPVDQINRLKREFQQVTGLKCSTFEIVAATCWSNRTRAVEFEPNTELKLVFFANCRQLMNPALPNGFYGNCFFPVTITASCESLRNATTVGVVKLIQEAKGKLGVEFDRYLKGEHFKNGEDPFAPPLTYTTLFVSEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSMPLPNKGIRLMTWCVEEPHRLPFLHQMHGAINQELSM* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2254 429 PANTHER ACYL TRANSFERASE 4 1 421 - -
Pvu1g2254 429 Gene3D - 203 411 IPR023213 -
Pvu1g2254 429 PANTHER ACYL TRANSFERASE 4 1 421 - -
Pvu1g2254 429 Pfam Transferase family 8 380 - -
Pvu1g2254 429 Gene3D - 2 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2254 Pvu-Chr1 48063262 48065613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2254 12 385 Monolignol Biosynthesis Gene Families AT5G48930 28.678 4.38e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2254 - - gmx:100783128 726.472