Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2245 ATGGGTGGCCATGCAGGCGCAACCAACTTCACGGCGTACACGGAGGCCAAGATTTCGGTGTGGTGGGACCTTCACAACTGCCGCGTTCCAAACGGTCAAGACCCTCACTCCGTCGTGCAGAACATCAACTCCGCCCTCATCAACTCCAACTACATCGGCGCTGTCACCATCTTCGCCTACGCCGACACCACACGTGTTCCCTCGCCCATCATAAACGCCCTCTCCAGCACCGGCGTTGTCCTCAACCACGTTCCTGCTGGTGTGAAAGGGAGCGACATGAGGATTCTGGTGGACATGCTGCTATGGGCCGTGGACAATCCCGCTCCCGCTAACTACCTGCTGATATCCGATGACAGAGACTTCTCCAACGCGCTTCACCAACTCAGTATGAGAAGGTACAACATTCTCTTGGCGCAGCCGCCGCAATTTTCTCCCTCCCTCTTCGCCGCCGCCAAAGTCGTTTGGCTCTGGTCTACTCTCTCCGCCGGCGGCCCCCCTCTCCACATCGTCGATTCTGACTCCGCTAAACCCTCCGTTCAATTCAAACCCAAAACTAAATACGCAATAAAAAGTACCACGAAACCCCCAGTTCCGCCTCTTCAAATACCTGATGAGAGTAGGAGTATAAACAATGATGTACCTAATCCGGAACCACAGAGAAAGTTCTTTATCGGAGCTCCTCATGAGTTCTTTGCTAGTAAATGTAACCAGTCCGTAAACCCAATCCCAGTCCCAATCCCAGTCCCAATCCCAAGTAGTTCTAAGTTGAATAATGAAACTACGATTCCTCAAGATTCACGCCAACATTCTCGGAGGCAAAAGCTAATTGAAATTCCTCGTGCTGTGGATGTTGTTAATCATCAGTGGGATGATTCTAGACCAAGCATTGGCCAGCCTGAGTTCAATGTGGAGGGGCTTATTGATGTTATTGTGAGAACCCTAAACTTTCTCAAGGTTGAAATGATTGTGCCCACCGAGGCGAATATAACCGATTCCATTCGTTATGGGGATCCCGTGTTCCAGACAATTGATGTTAGGAAGGCCTTGGATTTTGCCATAAGCCAACGTAGGGTGCAGAAACGAGTCGTTGGGGCGATGCATTTGTATATTGGAAGAAATGAGGCGCTCTGGAAGTGTGTGAACCATGCAGGGGGGCATCCCGGTGATTACCCGGAAGAAACATGGTACAAAGTTAAGCAGTTCCTTACTTCATCAAAAGGGAGATCGTTGTTCTTGATTTCCCGTTGCAGATTTGAAGCATGTTTGATTCTAAAGAGATCGTGCCTTGAAGAGGTTGTATTAGGGGAGGTGCTTAAAATTCTAGAGATGTTGATCACAGTCAAGAGATGGATTATTACACATCATCATAGTGGTTGGCAGCCGATTACCATTGGAGTTAAGGAGAGTAAAGGTGATGCAAATATTGATTCTGGTGATAACCTAGATCAAATATGA 1455 0.4852 MGGHAGATNFTAYTEAKISVWWDLHNCRVPNGQDPHSVVQNINSALINSNYIGAVTIFAYADTTRVPSPIINALSSTGVVLNHVPAGVKGSDMRILVDMLLWAVDNPAPANYLLISDDRDFSNALHQLSMRRYNILLAQPPQFSPSLFAAAKVVWLWSTLSAGGPPLHIVDSDSAKPSVQFKPKTKYAIKSTTKPPVPPLQIPDESRSINNDVPNPEPQRKFFIGAPHEFFASKCNQSVNPIPVPIPVPIPSSSKLNNETTIPQDSRQHSRRQKLIEIPRAVDVVNHQWDDSRPSIGQPEFNVEGLIDVIVRTLNFLKVEMIVPTEANITDSIRYGDPVFQTIDVRKALDFAISQRRVQKRVVGAMHLYIGRNEALWKCVNHAGGHPGDYPEETWYKVKQFLTSSKGRSLFLISRCRFEACLILKRSCLEEVVLGEVLKILEMLITVKRWIITHHHSGWQPITIGVKESKGDANIDSGDNLDQI* 485
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2245 484 Gene3D - 13 159 - -
Pvu1g2245 484 CDD PIN_limkain_b1_N_like 17 140 - -
Pvu1g2245 484 MobiDBLite consensus disorder prediction 190 209 - -
Pvu1g2245 484 Pfam NYN domain 17 152 IPR021139 GO:0004540
Pvu1g2245 484 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 1 173 - -
Pvu1g2245 484 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 283 462 - -
Pvu1g2245 484 PANTHER LIMKAIN B LKAP 283 462 IPR024768 GO:0005777|GO:0010468|GO:1903231
Pvu1g2245 484 PANTHER LIMKAIN B LKAP 1 173 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu1g2245 Pvu-Chr1 48017058 48019469 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2245 13 172 C2H2 Transcription Factor Family AT5G61190 65.217 8.09e-64 221
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2245 1 48017058 48019469 Pvu1g2245 1 48017058 48019469 ECH