Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2231 ATGGAGGAAACATTTGTACCCTTTGAAGGAATCAAGAATGATCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACGGGTGGAATCAAAGCAGGTTTAAGGATTTTGGCGCCCACCACATACATATTCTTTGCTTCAGCAATACCAGTCATTTCATTCGGGGAACAACTTGAGCGAGATACTGACGGTGTTCTAACTGCTGTTCAAACATTGGCATCCACTTCCATATGTGGCATCATACACTCAATCCTTGGAGGTCAACCTTTGCTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTTAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGCAATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCAGTGTTGCTATTCTTGCTAGCCATCTTAGGGGCTTGCTCTATAATCAACAGGTTTACCCGTATTGCAGGAGAACTATTTGGCATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTTGTTGACGAGTTTCGCATACCAGAAAGACAAAATCCAAAATCAATTGAGTTTATACCTTCATGGAGGTTTTCTAACGGGATGTTTGCTCTAGTGCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCTAGGTCATGGCGTTATGGTACTGGTTGGCTTCGCAGCCTAATAGCAGACTATGGTGTGCCACTTATGGTCCTGGTTTGGACAGGTGTATCCTACCTGCCTGCTGGAAGTGTTCCACATGGTATTCCAAGGCGCCTGTTCAGCCCGAATCCATGGTCACCGGGTGCATACGAGAATTGGACTGTTATTAAGGATATGGTTCATGTTCCTGTTGTCTACATAATCGGAGCATTTATCCCAGCCACCATGATTGCTGTGCTTTATTACTTTGACCATAGTGTAGCATCCCAGCTTTCCCAGCAGAGTGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTTCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTCTTGGAATTCCTCCAGCAAATGGAGTCATACCACAGTCTCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGGAACAAACTGGTGGTAACCGCACGAAAAAGTATGGGAAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGGTAGAAGCCTACCATCAAATGCAGACGCCTCTTATTTACCAGGACCCCTCTGCTCGAGCGCAAGGACTAAAAGAACTTAAAGAATCAACCATTCAAGCAGCTACTAGTATGGGAAACATGGATGCCCCCATAGATGAGACTTTATTTGATGTTGAGAAAGAAATAGACGATTTGCTGCCTGTTGAGGTTAAGGAACAGCGTCTGAGTAACTTTCTTCAAGCAATAATGGTGGGAGGATGCGTTGCAGCCATGCCTGTCCTCAAGAAAATACCAACCTCAGTCCTTTGGGGCTATTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAATCAATTCTGGGAAAGGATCTTATTGCTCTTCACTGCACCAAGCAGAAGATACAAGGTTCTTGAGGATTACCATGCTACTTTTGTAGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTACCTTCTTGTATGCTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTCCCTATGATGATCATGCTCTTAGTTCCGGTAAGACAGTACTTTCTCCCCAAATTTTTCAAGGGGGCACACCTTCAAGACTTGGATGCAGCCGCGTATGAAGAGCAAACAGCTTTGCCATTCAACCTTGCAACACAATCAGAGTTTGGAGGTGGTGCTTCTCATGTTGGAGAAGGTGAGATCCTAGATGAAGTTATCACAAGAAGCCGTGGCGAGTTTAGGCACACTAGCAGTCCAAAGATCACAAGCTCCACCACGACACCAAGAACTGATCCTAAAAGCCATCTAAGCCCACGCGTCTCATTTAGTTCACGCGTGGGTGAGCTCAAAACTGAGCAAAGTCCTCGATCTGGTGCAAGAGGTTCCCTCAGTCCAAACGCTGGAGAAGTGAGACTATCAAATCTGGGAAGAAGTCCTCTTAATCCAGATTCAAAACAGCAGGACCACAACTAA 2172 0.4461 MEETFVPFEGIKNDLRGRLMCYKQDWTGGIKAGLRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWTGWVCVWTAVLLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPERQNPKSIEFIPSWRFSNGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYLPAGSVPHGIPRRLFSPNPWSPGAYENWTVIKDMVHVPVVYIIGAFIPATMIAVLYYFDHSVASQLSQQSEFNLRKPSSYHYDLLLLGFLTLMCGLLGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARKSMGKNASLGQLYGNMVEAYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMDAPIDETLFDVEKEIDDLLPVEVKEQRLSNFLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGAHLQDLDAAAYEEQTALPFNLATQSEFGGGASHVGEGEILDEVITRSRGEFRHTSSPKITSSTTTPRTDPKSHLSPRVSFSSRVGELKTEQSPRSGARGSLSPNAGEVRLSNLGRSPLNPDSKQQDHN* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2231 723 MobiDBLite consensus disorder prediction 640 723 - -
Pvu1g2231 723 MobiDBLite consensus disorder prediction 649 716 - -
Pvu1g2231 723 Gene3D Helical hairpin bin 18 60 - -
Pvu1g2231 723 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Pvu1g2231 723 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Pvu1g2231 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Pvu1g2231 723 PANTHER BORON TRANSPORTER 2-RELATED 1 703 - -
Pvu1g2231 723 PANTHER ANION EXCHANGE PROTEIN 1 703 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2231 Pvu-Chr1 47901362 47905869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2231 1 694 Antiporters AT3G62270 82.590 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2231 K24194 - gmx:100776705 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2231 1 47901362 47905869 Pvu1g2231 1 47901362 47905869 ECH