Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2214 ATGTCAATCGGTTTAAAAATGTTTCAAGGCTTGCTGCTGAAATGGATGCTTATATTATCTTGCCTGGCATTTATGATTGTGGTTGGTGAAAATGATAAAACAATGGAGCTCCCTTCTTTATATGATTCTAGATCACCTTTGGCCTTTGCTGTTGTTCATGGTCTACATCTACCAGCAAGTCTCCATTTGTCTAAGCATGAGCTTTCTCAAGCTGCACCAATTGAAGCACTGTCACCAGTCATTCCTCCTTCGTATGGTCCCTTCTCAACTGCAGGCCCTTCTGTTTCAACTCAGCCACCATTGTCTCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGCCAGTAAGAGTTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAATCCTAGTTGGAATGATTTTCTTAATGAATTAGCTGTCCAGCTTGGGTTGCGAAATACTCAGATTGAACTGATAAACTTTTATGTACTCGGTGTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAGTGAAGTTTCTAAAATAAACTCTTCGCTTTCAATGCATAAGGTTAAACTAGACCCTCGATTAGTGGGTGGATACCAACTTCTCAATATAACTTGGTTTGAACCACCAGCGCCTTCACAAGCTCCTACGTTAGCTGCATCACCTGTGAAAACACCTTTGTATCATTCACCCACCGCTACATCATCATCATCCAGTTCTTCAGGAAGGCATTCAAATCTGTTTATTATTCTTGGAATTGCTATTGGCATAATCTTTATTGGTATCATATCTGTACTTATATTCTGTTTATGTACATTCCTGCCAAAAGCAAACGCACCTCCAGTAGAAACTGAAAAGCCAAGGACAGAGAGTACAGTTTCAGCTGTGGGTTCTCTTCCTCACCCAAGTAGTACTCGATTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCGAGCGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTCAAGGTGTCTTGAATGATGGTACTCCTGTTGCAATTAAGAGGCTTACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTGGAAGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCAGTAATCGTGACTCGTCACAAAATTTACTTTGCTATGAGCTTGTTCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATTAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCCCTTGATGCTGCAAGGGGACTTTCATACCTGCACGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTGGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCCAACTATTTGTCTACTCGAGTCATGGGGACATTTGGGTACGTTGCTCCTGAATATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTTGTCTTACTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCATCTGGGCAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGACAGGTTGGAAGAGATTGTTGATCCAAGCCTCGGGGGAAAGTATCCTAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAACCAGCGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCTGTGTTGGCCTCATCCAATACTCGAGCCAACCTGAGACAGTCCTCTAGCACTTTTGAATTTGATGGAGCATCTTCTGTATTCTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGAAAACGACAACATTTCTAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATGA 2043 0.4239 MSIGLKMFQGLLLKWMLILSCLAFMIVVGENDKTMELPSLYDSRSPLAFAVVHGLHLPASLHLSKHELSQAAPIEALSPVIPPSYGPFSTAGPSVSTQPPLSPYASNCCKQDMVLKRASKSCHCAYPIKLDLFLSNVSQNPSWNDFLNELAVQLGLRNTQIELINFYVLGVSTLNISMNITPHKGISFSASEVSKINSSLSMHKVKLDPRLVGGYQLLNITWFEPPAPSQAPTLAASPVKTPLYHSPTATSSSSSSSGRHSNLFIILGIAIGIIFIGIISVLIFCLCTFLPKANAPPVETEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFQGVLNDGTPVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTRANLRQSSSTFEFDGASSVFSSGPYSGLSAFENDNISRTVVFSEDLCEGR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2214 680 Pfam Protein kinase domain 337 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2214 680 PANTHER OS01G0750732 PROTEIN 93 680 - -
Pvu1g2214 680 Gene3D Phosphorylase Kinase; domain 1 318 413 - -
Pvu1g2214 680 ProSiteProfiles Protein kinase domain profile. 336 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2214 680 SUPERFAMILY Protein kinase-like (PK-like) 311 613 IPR011009 -
Pvu1g2214 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pvu1g2214 680 Gene3D Transferase(Phosphotransferase) domain 1 414 634 - -
Pvu1g2214 680 CDD STKc_IRAK 342 612 - -
Pvu1g2214 680 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Pvu1g2214 680 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 93 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2214 Pvu-Chr1 47703990 47710343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2214 45 680 Receptor kinase-like Gene Family AT4G02010 71.028 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu1g2214 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2214 - - gmx:100775615 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2214 1 47703990 47710343 Pvu7g2195 7 45244197 45249878 PCT