Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2210 ATGGACACTGATGCTAATGCCTCCCCCCAACCTGAGTCAGAGCCATCTTCAGAGCTCAAATCATCAGAGACTCAAACATCAAAGAAAAGGAAAATGGTTGAGAAAACAGTTGTGGCAGTGAGGATTGGAGAGAATGTTGGCAAGCTCAAGAATGAAGGGCTACCTTCGGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAACGCTCATCATCACATACACCTCTGCGCATAACCATCCATGCCCCACCACCACCACCACCACAAATTCACCCCAGCAACCAAAAGAATCCGAATCCGAAACCACCCAAGACCTCTCAGCTACCTCAAAGGAGGAAGATCCAGAACATATAGAAGAAGAGCAAAGGGATAATAATAATAATAAGCCCAGTGATGAAGAAAAATTTCTTTACTTGCAATCTCCAATACGATGCTCCCAAGACATAGAAATGGAACAAGAAGACCCTTTCAAGCTAAACACGGAGAAAAGCCATGAAAGAATAGATCTCCTCTTGGAGGAGGAAGAAGAGCCCCTTTGTTATGCACAAGTCAAGAACTTGTCTGCTTCCAAAAATGAAGAACTTGATTTTTTCGACGAGCTTGAGGAGTTGCCCATGTCTTCATCTTTCTTGCCCTTCACGAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTTTTGA 786 0.4389 MDTDANASPQPESEPSSELKSSETQTSKKRKMVEKTVVAVRIGENVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASTLIITYTSAHNHPCPTTTTTTNSPQQPKESESETTQDLSATSKEEDPEHIEEEQRDNNNNKPSDEEKFLYLQSPIRCSQDIEMEQEDPFKLNTEKSHERIDLLLEEEEEPLCYAQVKNLSASKNEELDFFDELEELPMSSSFLPFTRSIFSDERIPVAPF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2210 261 MobiDBLite consensus disorder prediction 139 164 - -
Pvu1g2210 261 MobiDBLite consensus disorder prediction 110 138 - -
Pvu1g2210 261 MobiDBLite consensus disorder prediction 110 170 - -
Pvu1g2210 261 SUPERFAMILY WRKY DNA-binding domain 53 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g2210 261 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 19 244 - -
Pvu1g2210 261 MobiDBLite consensus disorder prediction 1 32 - -
Pvu1g2210 261 Gene3D WRKY domain 42 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g2210 261 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g2210 261 MobiDBLite consensus disorder prediction 1 22 - -
Pvu1g2210 261 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g2210 261 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g2210 261 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 244 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2210 Pvu-Chr1 47682848 47684741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2210 11 124 WRKY Transcription Factor Family AT3G58710 58.621 5.79e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu1g2210 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2210 - - gmx:100127368 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2210 1 47682848 47684741 Pvu1g2210 1 47682848 47684741 ECH