Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2207 AAACAACTTCGAGAGACAACAAAATATGCTACAAGAAGAATCTTGAAGACCAGGATAAAACAATCAGCAAATGAAATCCATGCAAAGCAAGGGAAATCAGCTAAAGAAAAAGTTAGAAGACATTGGAAGAATATTGAGCCTTTGTTTGCAGAGGTTAAATCAGTAATATCAGAGAGGGGGTGTTTGGGTAGTGAGGAGAATACCAATATTCTATCTTCAAGAATTCGAAGTCCATTCTATAAGCACATTAGTCCCCCGAAGAGTATTGCAGATAACGATGAAATCAGCAACGAGGACTTTCCAATGGCAAAAAGCATTGAGATTCCATACGTGGAAAAACTACCCTCGTATACATCTTGGGTTTATGTGCCTAGAAATGAGAAAATGGCTGAAGATCAATCAGTTATTGGTAAGCAACAAATTTACTGTGATATCAATAAAGGTGAAATGGTTATATGCAGTGACAGTGAGGAAGAGACGGTAAATCTTGAAGATGTTAAACATGACTTCACTGAGGCTGAAGACCAAATTCTGTGGAAGACACTTCATGAATATGGATCAACTGAAAACGTACTGAGTATCGTTAAAGAGTTTGTTAACACAACTGTTTCACAAATCCAGGAGAGGTTTGAAAAACTCAAGGAAATTGAAATGGAAAGTCTAAACAAGCTTTCTAAAGATTGTCACTGTAGTGGATGCGAATCTCATCTTGGTATATGTTTGGAGAAAGGGTTGAGTGCTAGTTTAGGGTCTTTCGATAACCTTTTTTGTCGTCAATGCTTGATCTTTAATTGTTCTTTGCATGGCACTTCTCAACCTTTAATATATCCTACAGAAAAGCAACAAGTTTGGTCTGAAAATGAAGGTGATGACAGACAACCATGTAGTGATCAATGTGCCCTTCTGTTAAAGGATGTGAGGCTTTCATTAGAAAGTTCAGCTGAAGGTTCCTCTAAAGCCAAAAGTGTTAATCCAACAAAAGAGAACTCAACATTGCCTCCTAAAGAGTCTCTGGATTCTTGTAATAAGCTGAAGACAATCTTAGATGATACGGTCATCAACATTGATAATCACAACAAGGAACTGAATTTGGATGTTGGCAGTGAAGGAAAATGCGCAATGTATCATGAATCTTGTAGAAGTCTTGTTGAATATACTTCCAAAATAACAGTTTCTGGTAGTTCTAACCATGGTGAACGAGACAAGGAGGTTGTGGAAGGTCAAAAAGACATCCAACTGTCCAATTCAACAGAACTGCATGCTAAGGAGATAACAAGTAACCTGGATTGGAAACCTCTAGAAAGAGACTTATATTTGAAGGGAGTAGAAGTGTTTGGAAAAAACAGCTGTCTTATTGCTCGTAACTTACTTCCTGGATTGAAAACCTGCTCGGAAGTAGCTAGGTACATGTTTGCTGAGGAGGAGTCAATGCTCCATCGATCCATGCCACTTTCAATTGCAAATAACAATGATCACACTAATGCAGAGAGCATGGAGGAAGAGACGCCATCAAGATCACAGTTGCAGAGAAAAAAGGGAAAATATTCTCGAAAATCAGTTGTGCTCTCACCTAGATGGAGAAAAAAGGGTGATGGGAAAAAACGAAGTACTGCGCAGTATACTCCTTGTAGCTGTCAAGGAATGTGCACAAAGGAATGCACTTGCCATCGTGATGATACTCGTTGTGAAAAATATTGTGGGTGTTCGAAGTTTTGCGGTAACCGGTACAGAGGATGTTATTGTTCTAAGAATCAATGCAGAACTAGACAATGTCCATGCTATGCAATCAACCGTGAATGTGACCCAGATATTTGTCGAAATTGTTGGGTTAGTTGCAGTGATAGTTCATCGAGGGTGCTACCCGGAGAACTATCGAAGGAGCTACCTGAAGGTGGATATGGTCAGTGTGAAAATATGAATCTTCTTTTGGGTAAAAAAGAGAGGATTCTTTTGGCAAAGTCAAATGTTGTTGGATGGGGAGTCTTTGCAAAGAATCCAATTAAAAAAGATGCTTGTCTCGGAGAGTACACAGGTGAACTAATCACTCATAAAGAAGCAGAGAAACGTGGAAAAATATATAATCAAATAAATCATTCGTTCCTTTTTGATCTTAATGATAAGTGGGTTATCGATGCTCGTCGATATGGAGACAAATTAAAATTTGCAAATCACTCATCAAAACCCAATTGTTATGCAAAGGTGATGTTTGTTAGAGGAGATCATCGAGTTGGAATATATGCCAAGGAGAACATAAAAGTTGGTGAAGAAATTTTATATGATTATTTCTATAAAAAAGAATGTGCACCATTATGGGCTCGTCCATCTAATGATGAGGCTTCTAAGAAACATGGATCAGTTGTTTCTCAATGCAAGACAAAGGTTAATCAGCATAAGAAAAGGACTCAAGGAAGGAAGAAATAA 2421 0.3808 KQLRETTKYATRRILKTRIKQSANEIHAKQGKSAKEKVRRHWKNIEPLFAEVKSVISERGCLGSEENTNILSSRIRSPFYKHISPPKSIADNDEISNEDFPMAKSIEIPYVEKLPSYTSWVYVPRNEKMAEDQSVIGKQQIYCDINKGEMVICSDSEEETVNLEDVKHDFTEAEDQILWKTLHEYGSTENVLSIVKEFVNTTVSQIQERFEKLKEIEMESLNKLSKDCHCSGCESHLGICLEKGLSASLGSFDNLFCRQCLIFNCSLHGTSQPLIYPTEKQQVWSENEGDDRQPCSDQCALLLKDVRLSLESSAEGSSKAKSVNPTKENSTLPPKESLDSCNKLKTILDDTVINIDNHNKELNLDVGSEGKCAMYHESCRSLVEYTSKITVSGSSNHGERDKEVVEGQKDIQLSNSTELHAKEITSNLDWKPLERDLYLKGVEVFGKNSCLIARNLLPGLKTCSEVARYMFAEEESMLHRSMPLSIANNNDHTNAESMEEETPSRSQLQRKKGKYSRKSVVLSPRWRKKGDGKKRSTAQYTPCSCQGMCTKECTCHRDDTRCEKYCGCSKFCGNRYRGCYCSKNQCRTRQCPCYAINRECDPDICRNCWVSCSDSSSRVLPGELSKELPEGGYGQCENMNLLLGKKERILLAKSNVVGWGVFAKNPIKKDACLGEYTGELITHKEAEKRGKIYNQINHSFLFDLNDKWVIDARRYGDKLKFANHSSKPNCYAKVMFVRGDHRVGIYAKENIKVGEEILYDYFYKKECAPLWARPSNDEASKKHGSVVSQCKTKVNQHKKRTQGRKK* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2207 806 MobiDBLite consensus disorder prediction 482 520 - -
Pvu1g2207 806 Gene3D SET domain 540 763 IPR046341 -
Pvu1g2207 806 MobiDBLite consensus disorder prediction 494 508 - -
Pvu1g2207 806 CDD SET_EZH 647 763 - -
Pvu1g2207 806 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 15 805 IPR025778 GO:0031519
Pvu1g2207 806 SMART CXC_2 574 611 IPR033467 -
Pvu1g2207 806 Pfam SET domain 658 761 IPR001214 GO:0005515
Pvu1g2207 806 MobiDBLite consensus disorder prediction 314 337 - -
Pvu1g2207 806 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 11 795 IPR045318 GO:0006338|GO:0018024
Pvu1g2207 806 MobiDBLite consensus disorder prediction 776 806 - -
Pvu1g2207 806 ProSiteProfiles SET domain profile. 647 762 IPR001214 GO:0005515
Pvu1g2207 806 SUPERFAMILY SET domain 520 766 IPR046341 -
Pvu1g2207 806 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 11 795 - -
Pvu1g2207 806 Pfam CXC domain 578 609 IPR041355 -
Pvu1g2207 806 ProSiteProfiles CXC domain profile. 523 625 IPR026489 -
Pvu1g2207 806 SMART set_7 647 768 IPR001214 GO:0005515
Pvu1g2207 806 SMART sant 426 476 IPR001005 -
Pvu1g2207 806 SMART sant 166 216 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2207 Pvu-Chr1 47661603 47670038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2207 636 761 C2H2 Transcription Factor Family AT2G23740 30.070 4.19e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu1g2207 SET 1.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2207 - K11430 vun:114191063 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2207 1 47661603 47670038 Pvu1g2207 1 47661603 47670038 ECH
Pvu1g2207 1 47661603 47670038 Pvu7g2200 7 45288733 45299933 PCT