Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2179 ATGGCGGCAGAGGCGGCGTTGTTCTTTTCTGTGGCATCAGTGGTGGAGGACGTGCTTCAGCAGCACGGTCATCGCCTCAAAGATCTTGATTTGGAATCTAGGAAAGCAGAAGAAGCCGCATCCAGAAGATATGAGGCAGCGGGGTGGTTGAGAAAAATGGTGGGAGTTGTTGCGGCTAAAGATTTACCAGCGGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTCTGTAATGTTATTAATAAAGTTCAATCCGGAGCTGTTCCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCATCGATCCCTGATGGGGCACCATTAACAGCATATCAGTATTTTGAAAACGTGAGGAATTTCCTGGTGGCTGTCCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCGTCTAGGATTGTCAATTGCGTGTTGGCCCTGAAGTCCTATAGTGAATGGAAAATGAGCGGGGCAAATGGCGTGTGGAAATTTGGTGGAAATCTCAAACCCACTGTGTCTGCCAAATCTTTTGTTAGGAAAAACTCGGACCCATTTACTAATTCCTTGTCAAGGACTTCATCGATCAATGATAAACATCTCACTGTTCTTAATTCTGACGTAGACTCTGATAAATTGTCTGGTTCCCATTCTTTGAGTTCGCTTGTTCGTGCGATTCTATCAGATAAGAAGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTTTTGAGCAAGGTTGTAGAGGAGTTTGAACAACGAATAGCTAGCCAAGGTGATAAGGCAAAAGTAACTTCGATTGATACTGTTTCTCAAAGCAATGGTTCTGTTGTGGCAGATAAAAAGGGCGAGAAGAAGATTCATGCGGTAACGGAAAAAGAAGATGGCATTCATAAAAGTCAAGTTAATGCTATGGTAACAAAAAAAGAAGATCGCATTCATAAAAATCAAGTTGCTGACAAGGAATCGCAAAGGCAACTTCTGAAGCAGAAAATGCTCTTTGATCAGCAGCAAAAACAAATTCAAGAGCTAAGACATACTCTTCACACAACAAAATCTGGTATGCAGTTCATGGAAATGAAATTTCGTGAGGAGTTCTCCAATCTTGGAATGCACGTTCATGGCTTAGCTCACGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAGCTATACAATCAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTACTGTCGAGTAAGACCATTCTTTCCTGGACAACCAAACCATTTGAGCGCAGTGGAAAATACAGAAGATGGAACTATCACAGTTAATATTCCTTCAAAGAATGGGAAGGGACGCAGGTCCTTCAACTTCAACAAAATCTTTGGACCATCAGCAACCCAAGCTGAGGTCTTCTTGGACATGCAGCCACTCGTTAGATCTGTTCTTGATGGCTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAAATCACAGAGAAAAGCCAAGGTGTAAATTATAGGGCTCTAAGCGATTTGTTTCTTATAGCGGATCAAAGAAAGGACACTTTCCGCTATGATGTTTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGGGATCTTTTGGTCACTGATGGAACAAACAAAAGATTGGAAATTCGAAGTAGTTCTCAAAAAGGACTCAGCGTTCCAGAAGCAAGCCTTGTGCCTGTATCATCAACTATTGATGTTATTGAACTAATGAACCTTGGTCAAAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGCAGTAGCCGGTCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGGATAAATCTGAGGCCACAGGAGATAGACTAAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTCTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACATGTACCTTACAGAAACAGTAAACTCACACAACTACTCCAAAATTCGCTTGGAGGACAGGCAAAGACGCTAATGTTTGTTCACATAAGTCCAGAGAGTGATGCTATTGGAGAAACAGTTAGTACCCTAAAATTTGCTGAAAGAGTTGCCACAGTTGAACTTGGTGCCGCTAGAGTAAACAAAGATAGTTTAGATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCACTGGGAAGAAAGGAAGGAGAATCAGAACATTCCTTATGCAGCAGCTCCGAAAAATACAGGACAAAGGGTGATGAGCTTTCACCTTACCATGTGAACCTGCGAGATCCTGACACTGGGGATCAGCTTGGATGCCGGCGACCAATGGTGGAGGTCGGCAATATAGAGCTTCAGAGTAATAGCACAGTGAGGCAAAAAACTCAGAGCTTTGATTTTGATGAGATCTCAGCAAATTCACCACCATGGCCCCCGGTGAACAATAGTCTTGGACAAAACTATGCGGAGGATGACAAAGAATCTGGTTCTGGACAATGGGTTGACAAGGTCATGGTGAACAACAAGCAAGATGTAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAACAAGCAATGGGAACTTATCTGAGGCCTTTTATCAGAAATATCTTAAAGATTCTCCCAAAATGTACTCAGAACAATCCTACAATATGTTCATAGGAGGCAACCAGTTTAACATTGTGGGTTCAGATGACACCGATGAGCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTTAGCAGCATGACCAATGGAATTGGATCAAAAACTACAAGATCTATCTCTAAGTCAGCAAAAAGCCCTGAGTTGAGCAAGAATGCTGTTCATTCTTCTCCTCTGGGTCCTTCACCTTCATTGAAACAGTCCAATGGCGTCTCACATCGAACAGGAAGGCATCCGGCTCCAGTTGATGTGAAACGTAGAAGTGGGAGTAGAAAATAA 3078 0.4279 MAAEAALFFSVASVVEDVLQQHGHRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSASIPDGAPLTAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKMSGANGVWKFGGNLKPTVSAKSFVRKNSDPFTNSLSRTSSINDKHLTVLNSDVDSDKLSGSHSLSSLVRAILSDKKPEEVPMLVESVLSKVVEEFEQRIASQGDKAKVTSIDTVSQSNGSVVADKKGEKKIHAVTEKEDGIHKSQVNAMVTKKEDRIHKNQVADKESQRQLLKQKMLFDQQQKQIQELRHTLHTTKSGMQFMEMKFREEFSNLGMHVHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQPNHLSAVENTEDGTITVNIPSKNGKGRRSFNFNKIFGPSATQAEVFLDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSSSQKGLSVPEASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQNSLGGQAKTLMFVHISPESDAIGETVSTLKFAERVATVELGAARVNKDSLDVKELKEQIASLKAALGRKEGESEHSLCSSSEKYRTKGDELSPYHVNLRDPDTGDQLGCRRPMVEVGNIELQSNSTVRQKTQSFDFDEISANSPPWPPVNNSLGQNYAEDDKESGSGQWVDKVMVNNKQDVNKTENLLGCWQTSNGNLSEAFYQKYLKDSPKMYSEQSYNMFIGGNQFNIVGSDDTDELDAATSDSSEPDLLWQFNHSKLSSMTNGIGSKTTRSISKSAKSPELSKNAVHSSPLGPSPSLKQSNGVSHRTGRHPAPVDVKRRSGSRK* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2179 1025 SMART kinesin_4 409 744 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 Pfam Kinesin motor domain 417 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Pvu1g2179 1025 MobiDBLite consensus disorder prediction 1011 1025 - -
Pvu1g2179 1025 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Pvu1g2179 1025 Gene3D Kinesin motor domain 406 777 IPR036961 -
Pvu1g2179 1025 Coils Coil 743 770 - -
Pvu1g2179 1025 MobiDBLite consensus disorder prediction 961 1025 - -
Pvu1g2179 1025 Coils Coil 19 39 - -
Pvu1g2179 1025 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1022 - -
Pvu1g2179 1025 CDD KISc_C_terminal 409 738 - -
Pvu1g2179 1025 ProSiteProfiles Kinesin motor domain profile. 411 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 768 IPR027417 -
Pvu1g2179 1025 Gene3D - 27 182 IPR036872 -
Pvu1g2179 1025 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Pvu1g2179 1025 SMART ch_5 42 160 IPR001715 GO:0005515
Pvu1g2179 1025 PRINTS Kinesin heavy chain signature 484 505 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 PRINTS Kinesin heavy chain signature 606 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 PRINTS Kinesin heavy chain signature 637 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 PRINTS Kinesin heavy chain signature 686 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2179 1025 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1022 - -
Pvu1g2179 1025 MobiDBLite consensus disorder prediction 961 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2179 Pvu-Chr1 47408420 47414367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2179 399 788 Calmodulin-binding Proteins AT5G65930 40.921 2.21e-78 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2179 K10406 - gmx:100795476 1803.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2179 1 47408420 47414367 Pvu7g2236 7 45637044 45643450 PCT