Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2156 ATGGGAATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACCAAGCGAACCGCCCCAAAGTCCGATGATATCTACCTCAAGCTACTTGTCAAGTTGTACCGTTTTCTTGTTCGGAGGACTGGGAGTAATTTCAATGCCGTCATTCTCAAGCGTCTTTTCATGAGCAAGGTCAACAAGCCTCCGCTATCCCTCTCCAGATTGATCCGTTACACCAAGGGAAAGGAGAATAAGATAGCTGTGGTAGTTGGGGCTGTGACCGATGATATTCGTGTGTACGAAGTGCCTGCTCTGAAGGTAACAGCACTGAGGTTCACTGAAACTGCCAGAGCTAGAATTGAGAAAGCTGGCGGGGAATGCCTCACCTTTGATCAACTGGCTCTTAGAGCTCCACTCGGTCAAAACACGGTTCTTCTTAGAGGTCCTAAGAATGCTCGTGAGGCTGTCAAGCACTTTGGACCGGCTCCTGGTGTGCCCCATAGCCATTCCAAGCCCTATGTCCGTGCAAAGGGACGGAAATTTGAGCGGGCCAGAGGGAGAAGGAATAGCAGAGGCTTTAGAGTTTGA 564 0.4982 MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2156 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Pvu1g2156 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Pvu1g2156 187 Gene3D - 1 187 - -
Pvu1g2156 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Pvu1g2156 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2156 Pvu-Chr1 47224616 47226728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2156 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 8.81e-105 297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2156 1 47224616 47226728 Pvu1g2156 1 47224616 47226728 ECH