Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2146 ATGATTATTGTAGCACATCCTATGTTTCTGCTTCTATTGTTTCTTTCACTCCTATCAAGCACTGGCCAAATGGTATCTGCAAAAGGGAAGGACAATGTTAGAGAGGCTTGCAGTGTGACAAGGTACCAAAGCCTTTGCGTTCACTCTCTATCACATTTCTCCAACACTGCCGGAAGAAGCCCTAGCAAGTGGGCACGTGCTGGAGTCTCAGTGTCCATTGGGGAGGTTAAGAATGTTAAAGCGTATATTGCAGAATTGAAGAGGCATGGACACATGAAGGGAAGAAACAAAATTGCCCTTTCAGATTGTGCTGAATCTTTTGCCTATGCCCTTGACGAGCTTCACAGATCACTTGGTGTACTTCGGAGGCTAAGCAAAACCACGTTTAGCACCCAAATGGGAGACCTCAACACGTGGATCAGTGCAGCACTCACCGATGAAGAAACTTGTCTGGAAGGGTTTGAAGGAGAAAATGAGAAGCATGTTAAAGTGCTGCAAAACCGGGTTCAGAATGTGTCTTACATCACCAGCAACGCTCTAGCCCTTGTCAACAAACTTGCCACCACAGGTCTGGGAAGAATCAACGATCCATAG 594 0.4579 MIIVAHPMFLLLLFLSLLSSTGQMVSAKGKDNVREACSVTRYQSLCVHSLSHFSNTAGRSPSKWARAGVSVSIGEVKNVKAYIAELKRHGHMKGRNKIALSDCAESFAYALDELHRSLGVLRRLSKTTFSTQMGDLNTWISAALTDEETCLEGFEGENEKHVKVLQNRVQNVSYITSNALALVNKLATTGLGRINDP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2146 197 CDD PMEI-like_3 36 188 - -
Pvu1g2146 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Pvu1g2146 197 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Pvu1g2146 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 188 IPR035513 -
Pvu1g2146 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 181 - -
Pvu1g2146 197 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 16 181 - -
Pvu1g2146 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
Pvu1g2146 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2146 Pvu-Chr1 47153215 47154240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2146 33 191 Carbohydrate Esterase AT3G14310 33.939 1.98e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2146 - - gmx:100791264 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2146 1 47153215 47154240 Pvu1g2146 1 47153215 47154240 ECH