Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2143 ATGGTAAGTAAGGAAGAGAAAAACGTGTTCTCGGAACTAACAGACGACATCGTTTTGAACATCTTCTACAATCTCGAAGAAGATCCTCGCCACTGGGCTCGCTTGGCCTGCGTCTGCACCAAATTCTCTGCACTCATCACCGATTTCTGTTGGAAGACCAAATGCTCCCGTAACATCCCCTCCGACCTCCTCTCCGCCTCCGACCACCCGCCGCTCTCCCTCCACAAACTCGCCGTCTGCTGCCCCGGCCTCCGCCACGCCGGCCTCCTCTTCGACACCTCCGATTTCGGCCTTGAACGCGACCTCGGCGCTGACCTCTTCAACCACTCTTCCCCCTCCAATCCTACGCCGCCGCCACCGCCACCGCCTCCACAACCTCAATATCAACAAACAGTCTCCGATTCGGATACCTCCTCCTGTTCTTCTTCGTGTTGGTCGCTTTTTGATGACCTGTACTACGACACGCTCTACGTGGCGACCGAGTCGGAGGCGCCGCGGCTGGCGGAGTCGGTGAGCGCGGGCGTGGTCTCGAATGGCGCGTGCAAGAAGCGGAAGGTGTCGCGCGAGGGGCGGGCGCACCTGGCGTCGGGGAGCTGGAGCCTGAGCCGGGAGCAGGGGAGCAAGCTGCTAGGGAGGCAGTTCCGCGACGATATCCTGTACGTGTGCGACTTGCCGGGCTGCGTGCACAGGGAGGAGAAGAGGAACTACCGCCTCTTCAGAGGCGTTTTCAAGAACTTCAAACGCACTAGGGTTTGGAGAACCATTCACGACGGCAACAAGAGGAAGCTGGATCTGCCCTGCGCCTTCTGCGCCTGCAAATTCACCTGGGATCTCCACTCCGCCTTCTGCCTCCGCCGCGCATTCGGCTTCCACGACGACGGAGAGCCTGTGGTGAGAGCCTATGTTTGCGAGAATGGCCATGTCTCTGGTGCTTGGACCGATGTTCCCATGTACACTTGA 960 0.5958 MVSKEEKNVFSELTDDIVLNIFYNLEEDPRHWARLACVCTKFSALITDFCWKTKCSRNIPSDLLSASDHPPLSLHKLAVCCPGLRHAGLLFDTSDFGLERDLGADLFNHSSPSNPTPPPPPPPPQPQYQQTVSDSDTSSCSSSCWSLFDDLYYDTLYVATESEAPRLAESVSAGVVSNGACKKRKVSREGRAHLASGSWSLSREQGSKLLGRQFRDDILYVCDLPGCVHREEKRNYRLFRGVFKNFKRTRVWRTIHDGNKRKLDLPCAFCACKFTWDLHSAFCLRRAFGFHDDGEPVVRAYVCENGHVSGAWTDVPMYT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2143 319 SUPERFAMILY F-box domain 7 87 IPR036047 GO:0005515
Pvu1g2143 319 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 6 319 IPR040267 -
Pvu1g2143 319 PANTHER PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN 6 319 - -
Pvu1g2143 319 MobiDBLite consensus disorder prediction 112 128 - -
Pvu1g2143 319 MobiDBLite consensus disorder prediction 107 136 - -
Pvu1g2143 319 Gene3D - 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2143 Pvu-Chr1 47106896 47108263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2143 - - gmx:100789324 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2143 1 47106896 47108263 Pvu1g2143 1 47106896 47108263 ECH
Pvu7g1421 7 33911378 33915031 Pvu1g2143 1 47106896 47108263 PCT