Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2142 ATGGCGACGACTGGGTCGGAGAAACAGGTGATTGTGGCTGGAATCGACGACAGTGATTTCAGCTCGTACGCTCTCGGATGGATTATCGATCACTTCCTATTGCCGTCCCTTAATCTTAACTTCAAGCTTGTTCTTGTTTATGCCAGGCCTTCTGCTGCCTCTTCGGTTGGTTTTGTTGGCCCTGGAGCCGCTGAGGTTATGCCTATTGTGGAGGCGGATTTGAAAAGAACAGCTGCCAAAGTCACGGAATATGCTAAAGATCTATGCCAGAAGAAATCCGTAAAGGACGTATCAGTGGAAGTGGTGGAAGGTGATCCTAGAAATGTTCTTTGTGAGGCTGTGGAAAAGCACCATGCTTCAATGTTGGTTGTGGGTAGTCATGGTTATGGGGCTATAAAAAGGGCGGTTTTAGGCAGTGTAAGTGACTACTGTGCTCACCATGCACACTGCACTGTCATGATCGTGAAGAAGCCAAAGAACAAACACTGA 489 0.4744 MATTGSEKQVIVAGIDDSDFSSYALGWIIDHFLLPSLNLNFKLVLVYARPSAASSVGFVGPGAAEVMPIVEADLKRTAAKVTEYAKDLCQKKSVKDVSVEVVEGDPRNVLCEAVEKHHASMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKNKH* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2142 162 Gene3D HUPs 2 162 IPR014729 -
Pvu1g2142 162 PANTHER - 6 162 - -
Pvu1g2142 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 158 - -
Pvu1g2142 162 Pfam Universal stress protein family 10 156 IPR006016 -
Pvu1g2142 162 CDD USP_Like 11 155 - -
Pvu1g2142 162 PRINTS Universal stress protein signature 8 26 IPR006015 -
Pvu1g2142 162 PRINTS Universal stress protein signature 116 128 IPR006015 -
Pvu1g2142 162 PRINTS Universal stress protein signature 134 156 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2142 Pvu-Chr1 47101397 47103523 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2142 - - gmx:100306046 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2142 1 47101397 47103523 Pvu1g2142 1 47101397 47103523 ECH
Pvu7g1471 7 35414265 35415679 Pvu1g2142 1 47101397 47103523 PCT