Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2119 ATGGATGCGTGGAACGAAGATTTTGTGGAGCAGGAGATTGGGAGCTCCGCGGAATCGTTCCAGAAGTTTTTGCTTTCGCAGAGAGATCTCTTTCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACAGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAGAAAGAGTTGCGCGAGATCAGTGCTTTATTTGGTGTCACAGCGACGCAGGTGCGTGACTTTTTCACCGGTCAGCGCTCAAGAGTGAGGAGACTAGTGCAGTTTTCAAAGGAGAGGGCACTAGGATCTACTTCTTGTGGAGATCCTCACGATGATAAAATAATTTCTGATCCTGTGAGACTAATTAATCCAGCTTCCCTAAACTCTACTGTCCCATCCAGTGCTGAAGAAGCATCTTGTTCAACACAGGATGCAGCCTTGTCTGACCTAGATGACTCAGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAAGAGACATTTTCCGGGCAAGAGAAATTGATGGAGTGGATATTGACGATACAGAATTCTTCAGTATTGTTGTGGTTTTTGAACAGAGAAGGTGGAATAACTTTAGCTACTTGGTTGAATAAGGCAACTGTTGAGGAGCAAACCAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTTCGATTCTACAGGGCATCAGACATATCAAACAGGGCAAGGATTTTGTTGTCAAAGTGGAGCAAATTATTAGCGAGGAACCAAGTAATAAAGAAGCCCAATGGTGTCAGGCCTTCTAGTGATGGTCATAAAGAGTTGATATCTCAGAGTATTGGTCAATTTGTGGGCTCTGAATCATGGCATTCAAATATTGATGTTCCTGAAGACTTTTTCTCACTCTCAAGCGAATGTCTGGACAATTTCAGGAAAGTGGGATCTTCACAAGCTGCAAAATTGTTGACTCCTAGCTTGGATGATTCTAGTAAAAAGTCCACACTTGGTGTATTATCATCTCAATCTAGAGAGCGCAGAAAAATTCAATTGGTGGAACAGCCGGGCCAAAAGTCAGTTAGCAGAAACTCACAGGTGACGAGAGCAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAGAGCAAGTATGGGAAATCCGGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCTGAATAAACAGCCTCAGACAATTCCTGCCAGTATTGCAGCTTGCTCTTCTAAAGCTCCTACTCCTTACAAAATTGATGAAAACAAGAAACCTTTGTTACTTGCCTCTAAAACCAGCAATAGGCTGGAAGCTTATTCAAAACCGAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCATGAGGGTTCAGATCCCATGGAAAAGACCAGCAGAAGTGGAACTTAAAGATACCTGGAGAGTTGGTAGCGGTGAAAATAGCAAAGAGGTTGATGCCCAGAGAAACAGAGACCGCAGGGAAAAAGAAACTATATATAAAACTATCCAAGAAATCCCACCTAACCCAAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGTTACCAGATGGTGATGGTGCAGACATAACAGTTTCCCCCAATCAGGTTGCAGCTCATACTGTTCAAGGGGTGGCCTCCACTTCTTCGACAAGTATGGCTCCTGCTGAGCCTGATTTAGAATTGCTTGCCGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCCGGTAGCATACCCAGTGAAGAAATAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGCGAACTTGGGTTTAAGTGAAAATACAAATGGGAGCTATGGCACGAGTGTAAAAGCCCCGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTTAAGCGATCCAAGAACGAATGGATGGAGCTCAGAAGCATCGAAAAACCCCTTTTCACGGCGAAGTGTAGCATCTGATAGAATTATCCAGAACCATGCTGCAGTGGCAACTCCCAACTTATTAACTCAGATTCCCGTGACTAGTACTACTACAGTAAGGCAACAGCCAACAGTAGTGGTTTCATCTTCGAGGCATCTCACAAGCACCGCAGTTTCTCCATATTCACTGCATCAGGCAACTAATGTTAATCCTGAAAAGCAACAACCAGTGGGGCATGTACAAATACCACCCTCAAATGTAGGTTTAACCATGAAGAAGAACTTAATCACTACCAATGCATCTTCAGTTAACTTTTCTGGCACTCATACAACTCTATCAATGCGGAGTAATGGCACCAATTATGGTAATGACACCAATTATGTAAAACCCGTACATAATTTGAGTGTACAACATGAGGGTTTGTCTAATTCCTTCCCACAATCATCCTTCAAGTTACCCTCACCAACGCCGTCAAATTCAGCCTCACATCAACATGTGGTCCAGGAAGCCCATTACACTGAACCTCCTTATCGTAACCCTAGTCGTTCCTACCCACCACAAACCGAAAAATCAGACCATGGGTCTGAAAGCATGTGGAGAGTTAGGCAAGATGTGTCACCCAGTTATCATTCTCAAAGAAATCATAACAACTATAACGCAATGGCTGGGGGATCCAGGCAATCTGGTGTTTGGGATAGGAATAATCACGGAAGGGAGGGTTTTGAATCATGGAGTCCTGAAAATAGTCCAACTAGAAATCCTAGGCATATACCAGGTAGAAACTACCCAGAGTCCAGAGTGAATCATGGAAGAAATCATAGACCTGAATGGTCAAGGGAGAGGGGTTCTTCCGGACACTGGGACCCTGGCAGGCAGGTAAATAGAAAGTGGCATGATCAGAGGCGATAA 3081 0.4291 MDAWNEDFVEQEIGSSAESFQKFLLSQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQFSKERALGSTSCGDPHDDKIISDPVRLINPASLNSTVPSSAEEASCSTQDAALSDLDDSDKHFVDNIFSLMQKEETFSGQEKLMEWILTIQNSSVLLWFLNREGGITLATWLNKATVEEQTSVLLLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRASDISNRARILLSKWSKLLARNQVIKKPNGVRPSSDGHKELISQSIGQFVGSESWHSNIDVPEDFFSLSSECLDNFRKVGSSQAAKLLTPSLDDSSKKSTLGVLSSQSRERRKIQLVEQPGQKSVSRNSQVTRAGPVSQGRPMSADDIQKAKMRALFMQSKYGKSGSKESKETKIDSLNKQPQTIPASIAACSSKAPTPYKIDENKKPLLLASKTSNRLEAYSKPKMDVKEPLWEKCMRVQIPWKRPAEVELKDTWRVGSGENSKEVDAQRNRDRREKETIYKTIQEIPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADITVSPNQVAAHTVQGVASTSSTSMAPAEPDLELLAVLLKNPELVFALTSGQAGSIPSEEIVKLLDMIKRGGANLGLSENTNGSYGTSVKAPEKVEVSLPSPTPLSDPRTNGWSSEASKNPFSRRSVASDRIIQNHAAVATPNLLTQIPVTSTTTVRQQPTVVVSSSRHLTSTAVSPYSLHQATNVNPEKQQPVGHVQIPPSNVGLTMKKNLITTNASSVNFSGTHTTLSMRSNGTNYGNDTNYVKPVHNLSVQHEGLSNSFPQSSFKLPSPTPSNSASHQHVVQEAHYTEPPYRNPSRSYPPQTEKSDHGSESMWRVRQDVSPSYHSQRNHNNYNAMAGGSRQSGVWDRNNHGREGFESWSPENSPTRNPRHIPGRNYPESRVNHGRNHRPEWSRERGSSGHWDPGRQVNRKWHDQRR* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 405 423 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 990 1026 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 710 728 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 377 430 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 864 1026 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 925 955 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 864 891 - -
Pvu1g2119 1026 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 1026 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 685 728 - -
Pvu1g2119 1026 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 377 396 - -
Pvu1g2119 1026 SMART HOX_1 68 130 IPR001356 GO:0003677
Pvu1g2119 1026 CDD homeodomain 69 125 IPR001356 GO:0003677
Pvu1g2119 1026 Gene3D - 66 127 - -
Pvu1g2119 1026 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 1026 - -
Pvu1g2119 1026 MobiDBLite consensus disorder prediction 965 979 - -
Pvu1g2119 1026 SUPERFAMILY Homeodomain-like 69 131 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2119 Pvu-Chr1 46955127 46963570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2119 464 759 Homeobox Transcription Factor Family AT4G02560 42.282 2.05e-48 185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2119 1 46955127 46963570 Pvu1g2119 1 46955127 46963570 ECH