Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2086 ATGAGATTTTTTCTTGTAGCTTGTTTGACAGTGTTCTGTATCCTTGGGGCTTGTCAAGGTGGCAACCTTAGAAAGAATTTCTATAAGCAAACATGTTCTCAAGCCGAGCAGATTGTTAGGACCAAAATCCAGGAACATGTCTCTGCAAGGCCTGATTTGCCTGCCAAGTTGATCAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGTTCGGTTTTGCTGGATTCCACTGCCACCAACACAGCAGAGAAGGATTCCATTCCTAACTTATCTTTGTCTGGCTTCGATGTCATTGATGACATAAAAAAAGCATTGGAGGCAAAATGTCCTGGAACTGTATCTTGTGCTGACATACTTACATTGGCTGCAAGGGATGCTGTTTCTGTCCAATTCAACAAGCCTATGTGGGAAGTGCTTACCGGTAGAAGAGATGGGAGAGTATCCATCAGTGGTGAAGCCTTAGCCAATCTACCAGCACCTTTTTTCAACATTAATCAGCTCAGAAAAAGCTTTGAGAGTAAAAAGCTTACAGTGCACGACCTGGTTGTGTTATCAGGAGCACACACATTTGGAGTTGGTCATTGCAACTTATTCAGTAACAGGATTTTCAACTTCACCGGAAAAGGTGATCAAGATCCTTCTCTGAATCCTACTTATGCCAATATTTTGAAGTCAAAATGCAAAGGTCTCAGTGACACCACCACAGCAGTGGAGATGGATCCTAACAGCCCAATCACCTTCGACAGTGACTATTATTCGATCCTTCTTCAGAACAAGGGTTTATTCCAATCAGATGCTGCCCTTTTAACAGCCAAGGTGTCAAGAAACATTGTGAACGAATTGGTGAAACAAGACAAGTTCTTCACAGAGTTTGGGCAGTCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACAGACTCAGATGGGGAAATTAGGACAAAGTGCTCTGTTGTCAACTCTTAA 969 0.4272 MRFFLVACLTVFCILGACQGGNLRKNFYKQTCSQAEQIVRTKIQEHVSARPDLPAKLIRMHFHDCFVRGCDGSVLLDSTATNTAEKDSIPNLSLSGFDVIDDIKKALEAKCPGTVSCADILTLAARDAVSVQFNKPMWEVLTGRRDGRVSISGEALANLPAPFFNINQLRKSFESKKLTVHDLVVLSGAHTFGVGHCNLFSNRIFNFTGKGDQDPSLNPTYANILKSKCKGLSDTTTAVEMDPNSPITFDSDYYSILLQNKGLFQSDAALLTAKVSRNIVNELVKQDKFFTEFGQSMKRMGAIEVLTDSDGEIRTKCSVVNS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2086 322 Gene3D - 26 321 - -
Pvu1g2086 322 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 Gene3D Peroxidase, domain 2 160 300 - -
Pvu1g2086 322 CDD secretory_peroxidase 22 320 IPR033905 GO:0004601|GO:0042744
Pvu1g2086 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pvu1g2086 322 Pfam Peroxidase 39 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PANTHER PEROXIDASE 3 320 - -
Pvu1g2086 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Pvu1g2086 322 ProSiteProfiles Plant heme peroxidase family profile. 22 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g2086 322 PANTHER PEROXIDASE 25-RELATED 3 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2086 Pvu-Chr1 46687437 46688956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2086 1 322 Peroxidase AT1G05260 53.538 9.28e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2086 K00430 - gsj:114405310 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2086 1 46687437 46688956 Pvu7g1719 7 39899601 39901100 PCT
Pvu7g2646 7 49512951 49517222 Pvu1g2086 1 46687437 46688956 PCT