Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2062 ATGGGTTCTCTCCCCCACGTAGTAGAGGACTGTTTGGGGTTCCTCCAACTTTTCAGCGACGGTTCTGTTTTCCGTTCCAACGATATAGACTTCAAAATTTCAGCCGTTCAAGATCACTCCGTAACCTTCAAGGACTATCTCTTCAACAAGAGATTCAACCTTTCTCTTCGCTTCTACAAACCCAAACACGTAACACTCAACACCAAGAACATTCCTATTGTCATTTTCCTTCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACGTGGCCCCATATTCACAACTGTTGCACGCGCCTCGCTTCGGGGCTCCAAGCGGCCGTCCTCTCGCCGGACTACCGCCTGGCGCCCGAGCACCGCCTTCCGTCTGCGGTGGAAGACGCGGTGGAGGCGGTGAGGTGGCTCCAGAGGCAGGGACTGAGGCAGAAGGAAGATGAAAACGGTGGGGACGAGTGGTTGAGTGGTGACGTTGACTTTGACCGCGTGTTTGTCGTCGGTGACTCCTCTGGCGGGAACATTGCGCACCACCTCGCGGTTCGGTTGGGGTCCGGTTCGAGTGAGATGGACCCGGTTCGGGTACGAGGTTACGTGTTGTTTGCGCCGTTTTTTGGCGGGGAGGTTCGGACCAAGTCCGAGGAAGGTCCAGCAGAGCACATGTTGAACCTTGAGTTATTGGACAGATTTTGGAGATTGTCGATGCCTTTTGGAGAATCAAGAGACCACCCATTGGCGAATCCGTTTGGACCAGGAAGCCCAAATCTTGAAGAAGTGAAGCTTGATCCTATTTTGGTGATAGTTGGTAGCAATGAATTGCTTAAGGATAGAGCAGAAGAGTATGCTAGGAGGTTAAAAGAACTGGGCAAAGACATTGAATACCTCGAGTTTGAGGGGTGCGAGCATGGCTTTTTCACGCATCATTCATACTCATCAAAACTTGCAGAAGAGGTCATCCAAATCCTTAAGCGATTCATGCTTCAAACTTCCACTTTATTAGAACCCACATGCCTCAAAAATATCAATGGGTAG 1023 0.5093 MGSLPHVVEDCLGFLQLFSDGSVFRSNDIDFKISAVQDHSVTFKDYLFNKRFNLSLRFYKPKHVTLNTKNIPIVIFLHGGGFCFGSRTWPHIHNCCTRLASGLQAAVLSPDYRLAPEHRLPSAVEDAVEAVRWLQRQGLRQKEDENGGDEWLSGDVDFDRVFVVGDSSGGNIAHHLAVRLGSGSSEMDPVRVRGYVLFAPFFGGEVRTKSEEGPAEHMLNLELLDRFWRLSMPFGESRDHPLANPFGPGSPNLEEVKLDPILVIVGSNELLKDRAEEYARRLKELGKDIEYLEFEGCEHGFFTHHSYSSKLAEEVIQILKRFMLQTSTLLEPTCLKNING* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2062 340 PANTHER ARYLACETAMIDE DEACETYLASE 4 324 - -
Pvu1g2062 340 Coils Coil 268 295 - -
Pvu1g2062 340 Gene3D alpha/beta hydrolase 17 328 IPR029058 -
Pvu1g2062 340 PANTHER CARBOXYLESTERASE 15-RELATED 4 324 - -
Pvu1g2062 340 SUPERFAMILY alpha/beta-Hydrolases 4 321 IPR029058 -
Pvu1g2062 340 Pfam alpha/beta hydrolase fold 74 302 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2062 Pvu-Chr1 46484384 46486904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2062 7 301 Carbohydrate Esterase AT5G16080 34.884 2.63e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2062 - - pvu:PHAVU_001G198900g 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2062 1 46484384 46486904 Pvu1g2062 1 46484384 46486904 ECH
Pvu1g2062 1 46484384 46486904 Pvu7g2729 7 50253902 50256944 PCT