Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2057 ATGGAAAATGCAAGTACATCCAGCTTGGCGAGAACGCAATCGGAGGATATGGCGGAGACGGTGGCAACGGCATGTGTGAAGTCGCCGCCGTTGGCGGAGGGTGGCGGACTGCTGTCGAGGAAACCGAGCCAGAGGATGACGACGGCCTCACCGAGTGGCGGCGGAGTAAGAAACTCACGCATAAGGAGGGCGAGGAGCGCTCAGTTGAAGGTGGAGGTGGATGAGGTTGGCAGCGGCGTGGCTCTGAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCATTCTCCTTTACTGGCTTCACTCTTCCTCCCGATGAAATCGCCGATTCAAAACCTTTCAGCGACGATGATATCCCGGAGGATATTGAAGCCGGAACTCATAAGCCTAAGTTTCAGACAGAACATACTCTGCCAATATATCTGAAGTTCACCGATGTGACCTACAAGGTAGTGATTAAAGGCATAACTACAACTAAGGAGAAGGATATCTTGAAGGGGATCACTGGTTCTGTTAATCCTGGGGAGGTTCTGGCATTAATGGGTCCTTCAGGCAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTAATTCAGTCCACAATTGGTGGCTCTATTACTTACAATGACCAACCTTATTCCAAGTTTCTAAAGAGCAGGATTGGATTCGTGACACAAGACGATGTTCTGTTTCCACACCTTACTGTTAAAGAAACATTGACCTATGCTGCCCGCTTAAGATTGCCAAATATGTTAACGAAAGAGCAAAAGGAAAAACGAGCTTTAGATGTCATCGAAGAGCTGGGATTAGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGTATTGGAAGTGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATAGTTCAGGTTCTACAAGACATAGCAGAGGCTGGTAAAACCGTAGTGATAACAATCCATCAACCATCTAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTCCAGTTTATAGGGTGTGCACCCCTTATTACCATGAACCCAGCTGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTACCATCAGAGTTAAAAGATAGAGTGCAGATGGGAAATGCTGAAGTTGAAACATGCAATGGCAAACCATCTGCTTCCGTTGTACAGGAGTATCTGGAAGAGGCATATGATTCTCGAGTGGCAGAAATAGAGAAGACAAAGTTAATGGTTCCTGTCCCTCTTGATGAAGAACTGAAGTCTAAAATTTATTCTTGTAAAAGACAGTGGGGGACAAGTTGGGTTGAACAATTTTCAATATTATTTTCAAGAGGATTCAAAGAGAGGAAGCATGACTATTTTAGCTGGTTGAGAATTACCCAAGTTCTTTCAACTGCAGTCATCTTAGGATTACTTTGGTGGCAGTCAGATGCTAACAACCCAAAAGGTTTGCAAGATCAGGCAGGACTTCTCTTCTTTATTGCTGTGTTTTGGGGATTTTTTCCCGTCTTCACTGCAATATTCACATTTCCTCAAGAGAGGGCCATGCTGACTAAGGAACGAACAACGGATATGTACAGACTAAGTGCATATTTTGTGGCCAGAACTACAAGTGACCTTCTACTGGACTTAGTGTTACCAATCTTTTTCCTCCTTGTTGTTTATTTCATGGCCAGTTTGAGACTCAGTGCAGGGCGTTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATCATAGCAGCTCAGGGACTTGGACTTGCAATTGGGGCTACACTAATGGACTTGAAAAGGGCCACGACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGATTTTTTGTGCAGAAAGTCCCAATATTCATATCTTGGATTCGCTACCTCTCTTTCAACTACCATACGTATAAACTTTTGCTTAAGGTTCAATATGAACACGTTACACGGACCATAAATGGGATCACACTTGACAGTGGATTCACAGAGGTTGCTGCTCTGCTAGCCATGGTTTTTGGTTACCGTCTGCTGGCATATATCTCCTTGCGGCGGATGAAACTTCAAGGTGGAAATTAA 2211 0.4396 MENASTSSLARTQSEDMAETVATACVKSPPLAEGGGLLSRKPSQRMTTASPSGGGVRNSRIRRARSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGTHKPKFQTEHTLPIYLKFTDVTYKVVIKGITTTKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNMLTKEQKEKRALDVIEELGLERCQDTMIGGSYVRGVSGGERKRVCIGSEIIINPSLLFLDEPTSGLDSTTALRIVQVLQDIAEAGKTVVITIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFQFIGCAPLITMNPAEFLLDLANGNVNDISVPSELKDRVQMGNAEVETCNGKPSASVVQEYLEEAYDSRVAEIEKTKLMVPVPLDEELKSKIYSCKRQWGTSWVEQFSILFSRGFKERKHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPIFFLLVVYFMASLRLSAGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYLSFNYHTYKLLLKVQYEHVTRTINGITLDSGFTEVAALLAMVFGYRLLAYISLRRMKLQGGN* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2057 736 MobiDBLite consensus disorder prediction 1 62 - -
Pvu1g2057 736 Pfam ABC-2 type transporter 481 690 IPR013525 GO:0016020|GO:0140359
Pvu1g2057 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 380 IPR027417 -
Pvu1g2057 736 MobiDBLite consensus disorder prediction 41 55 - -
Pvu1g2057 736 Pfam ABC transporter 163 314 IPR003439 GO:0005524
Pvu1g2057 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 730 - -
Pvu1g2057 736 SMART AAA_5 172 363 IPR003593 -
Pvu1g2057 736 Gene3D - 139 380 IPR027417 -
Pvu1g2057 736 Pfam ABC-2 type transporter 343 404 IPR043926 GO:0140359
Pvu1g2057 736 MobiDBLite consensus disorder prediction 1 19 - -
Pvu1g2057 736 CDD ABCG_EPDR 137 368 - -
Pvu1g2057 736 ProSitePatterns ABC transporters family signature. 286 300 IPR017871 GO:0005524
Pvu1g2057 736 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 29 730 - -
Pvu1g2057 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 140 386 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2057 Pvu-Chr1 46436812 46444971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2057 126 415 Calmodulin-binding Proteins AT2G36910 27.000 3.60e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2057 K05681 - gmx:100796008 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2057 1 46436812 46444971 Pvu7g2733 7 50295129 50306636 PCT