Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2021 ATGGCCGATAAACGCCAAAGAAACTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATCGTCCTCGCTGGCCTCGCAATCCTCATATTCTGGCTGGTAGTTCAACCCCGCTCCTTCAAGTTCCATGTCACGGAAGCCGATCTCACCCAATTCGAATACCACACCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACCGCACGCAACCCCAACAAAAAACTCAGCATCTACTACGACAAAGTAGAGGCATTAGCATTCTACGAGGATGCCAGGTTCTCGAATTACGATGTCATAACGCACATGAACTCCTTCCGGCAATACACGAAGAGCAGCAGTCCCATGAGCGCTGTTTTCTCAGGGCACCGAGTGCTGACACTAGACAATGAGCAAATCTCCGAGTTGAACCAAGACAAGAGTGATGGCGTTTACGACATCTATGTGAAGCTCAACTTCAGGATTAGATTCAGACTCGGGGATTACATATCCGGTAACTTGAAACCCAAGGTCAAATGTGACCTCAAGGTTCCCTTCGCTAACAATGGCACCCTAACTTTCTTTCAGACCACCAAGTGCGACGTCGATTACTAG 612 0.4853 MADKRQRNCCCCLFGILWKILVALIVLAGLAILIFWLVVQPRSFKFHVTEADLTQFEYHTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFSNYDVITHMNSFRQYTKSSSPMSAVFSGHRVLTLDNEQISELNQDKSDGVYDIYVKLNFRIRFRLGDYISGNLKPKVKCDLKVPFANNGTLTFFQTTKCDVDY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2021 203 Pfam Late embryogenesis abundant protein 73 179 IPR004864 -
Pvu1g2021 203 PANTHER OS05G0367900 PROTEIN 4 201 IPR044839 GO:0098542
Pvu1g2021 203 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2021 Pvu-Chr1 46076945 46077556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2021 38 186 SNARE and Associated Proteins AT1G32270 32.215 1.22e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2021 - - gmx:547482 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2021 1 46076945 46077556 Pvu1g2021 1 46076945 46077556 ECH
Pvu1g2021 1 46076945 46077556 Pvu7g2767 7 50696738 50697662 PCT