Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2020 ATGGTCGATAAGCAACCCCACTTGAACGGCTCCTATTACGGTCCCGCCATTCCTCCGGCGGCGCAACCACGCTACCGCCATCACCATGGAAGAAGCTGTTGTTGCTGCCTCTTCGGAATATTGTGGAAGATTCTGGTTGCACTCATCGTCCTCGTTGGCCTCGCAATCCTCATATTCTGGCTGGTAGTTCAACCCCGCTCCTTCAAGCTCCATGTCACGGAAGCCGATCTCACCCAATTTGAATACAACACCAACAACAACACCCTTCACTACAACATGGTCCTCAACTTCACCGCACGCAACCCCAACAAAAAACTCAGCATCTACTACGACAAAGTAGAGGCATTAGCATTGTACGAGGATGCCAGGTTCTCGAATTACGATGTCATAACGCACATGAACTCCTTCCGGCAGTACACGAAGAGCAGCAGTCCCATGAGCGCTGTTTTCTCAGGGCACCGAGTGCTTACACTAGACAATGAGCAAATCACTGAGTTGAACCAAGACACGAATGATGGCGTTTACGACATCTATGTGAAGCTCTACTTCAGGATTCGGTTCAAGCTCGGGGATGTCATATCTCGTCACTTGAAGCCCAAGGTCAAATGCCACCTCAAGGTTCCAATGAGTAAAATTGGCACCCTAACTTTCTTTCAGACCACTAAATGTTCAATCCATTTCTAG 684 0.4883 MVDKQPHLNGSYYGPAIPPAAQPRYRHHHGRSCCCCLFGILWKILVALIVLVGLAILIFWLVVQPRSFKLHVTEADLTQFEYNTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALALYEDARFSNYDVITHMNSFRQYTKSSSPMSAVFSGHRVLTLDNEQITELNQDTNDGVYDIYVKLYFRIRFKLGDVISRHLKPKVKCHLKVPMSKIGTLTFFQTTKCSIHF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2020 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Pvu1g2020 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
Pvu1g2020 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2020 Pvu-Chr1 46072564 46073247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2020 62 210 SNARE and Associated Proteins AT1G32270 31.544 5.35e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2020 - - gmx:100794249 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2020 1 46072564 46073247 Pvu7g2768 7 50697839 50699054 PCT