Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2018 ATGTCGCAGTTGAACGGAGCCTACTACGGCCCCGCTATTCCGTCGCAGAAGTCCTACCACCGCCCAGGGCGCGGCGGCGGCTGTGGCTGCTGCTGCGGCTGCCTCTTCAGCCTCATCTTCAAGCTCATCCTCACGGTGATCATCATCGTGGGCATCGCCGCGTTCCTCTTCTGGCTCATAGTCCGTCCCAACGTCGTGAAAGTCCACGTCACTGACGCCACCCTCACGGAGTTCAACTACACCAACAACACCCTCCGCTACGATCTTGCCCTCAACATCACAGTGCGCAACCCTAATAAGAGGCTGGGCATCTACTACGACTATATCGAGGCGCGCGCATTGTTCCACGACGCCAGGTTCAACTCCCAGTACCCCGATCGCTTCTACCAGGGGCACAAGACCACGAACGTGTTGAACCCCGTGTTCAAGGGGGAGCATATTCTGGCTCTCAAAGCTGACCAGAGCGCCGAATTTAAGAAGGAGAACGCCACTGGGTTGTATGAGATCGATGTGAAGATGTACCTGAGGGTGAGGTTCAAGTTGGGCGTCTTCAAAACCAAGACGCTCAAGCCCAAAGTCAGCTGCGACTTGCGTGTGCCTATCAAGGGAACAGCCACCGCCTTTGAAACCACCAAGTGCGACTGGGATCGTTGA 654 0.5657 MSQLNGAYYGPAIPSQKSYHRPGRGGGCGCCCGCLFSLIFKLILTVIIIVGIAAFLFWLIVRPNVVKVHVTDATLTEFNYTNNTLRYDLALNITVRNPNKRLGIYYDYIEARALFHDARFNSQYPDRFYQGHKTTNVLNPVFKGEHILALKADQSAEFKKENATGLYEIDVKMYLRVRFKLGVFKTKTLKPKVSCDLRVPIKGTATAFETTKCDWDR* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2018 217 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 20 215 - -
Pvu1g2018 217 Pfam Late embryogenesis abundant protein 92 195 IPR004864 -
Pvu1g2018 217 PANTHER OS05G0367900 PROTEIN 20 215 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2018 Pvu-Chr1 46060727 46061856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2018 60 201 SNARE and Associated Proteins AT1G32270 37.063 3.13e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2018 - - gmx:100793187 370.548