Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1954 ATGAACTTCACCAACCAACTCTTTCTTCTTCTCACTCTTTTCTCTGTTCTATTTCTCTCAGGAGAAAGGGTGTTGCAAACGGAGGCTGCCCATCACCACCATCATCATCATCATCATCATCATGATCATGGTCCAACAAAGTTGTTCGTTTTCGGAGACTCGTATGCTGACACAGGCAACATTCAGAAAGCTGTTTCAAACTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGCAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAGAGTGAAATCACCAATTCCTTACAGATATAGAAAACTGATGCCACAACATGTAAAATATGGGATGAACTTTGCGTTTGGAGGTACCGGTGTGTTTAACACGTTGATTCCATTGCCAAACATGACAACCCAAATCGATTTCTTGCAACAGCTCATCAAAGACAAAGTCTACTCTGCCTTAGATCTCACCAACTCAGTTGCCCTTGTTTCTGTCGCTGGCAATGACTACAGTCACTTCACACAAACAAATGGCTCTCAGGGTTTAGCATCTTTCGTGGCCTCAGTGGTTAATCAAACAGTGATGAATATGATTCGCATGAGAGAGGTGGGAGTGAAGAAAATAGTGGTGGGTACTCTGCAACCCCTTGGATGCCTTCCCGAGATCACAGCCGCAACCTCATTCCAACGTTGCAATGAAACCAACAACGCCTTCGTGCTTCTCCACAACACCCTCTTGAGCCAAGCAGTGACCAAATTAAACCAGCAAACCAAGGACCGTTCCACCTTTCTAATTCTTAACCTTTTTGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACAAACAACATTCGGGACGGGTTGAAGCCATGTTGTGTTGGTGTGAGCAGTAAGTACTCGTGTGGGAGTGTGGAGAACAATGTTAGGAAATATAGGGTATGTGATGACCCAAAATCTGCTTTCTTTTGGGATCTTGTGCACCCTACACAAGCTGGATGGCATGCAGTGTACAACAAGTTGCGAACCATGGATGATCTTCATCGGATTCTTGACTAG 1071 0.4528 MNFTNQLFLLLTLFSVLFLSGERVLQTEAAHHHHHHHHHHHDHGPTKLFVFGDSYADTGNIQKAVSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLRVKSPIPYRYRKLMPQHVKYGMNFAFGGTGVFNTLIPLPNMTTQIDFLQQLIKDKVYSALDLTNSVALVSVAGNDYSHFTQTNGSQGLASFVASVVNQTVMNMIRMREVGVKKIVVGTLQPLGCLPEITAATSFQRCNETNNAFVLLHNTLLSQAVTKLNQQTKDRSTFLILNLFDSFMSVLNHPSTNNIRDGLKPCCVGVSSKYSCGSVENNVRKYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMDDLHRILD* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1954 356 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 356 - -
Pvu1g1954 356 Gene3D SGNH hydrolase 31 349 IPR036514 -
Pvu1g1954 356 PANTHER OSJNBB0059K02.9 PROTEIN 1 356 - -
Pvu1g1954 356 SUPERFAMILY SGNH hydrolase 45 345 - -
Pvu1g1954 356 Pfam GDSL-like Lipase/Acylhydrolase 48 344 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1954 Pvu-Chr1 45506495 45509704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1954 3 341 Pollen Coat Proteome AT1G75930 25.956 1.88e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1954 - - vun:114165063 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1954 1 45506495 45509704 Pvu1g1954 1 45506495 45509704 ECH
Pvu1g1954 1 45506495 45509704 Pvu7g2350 7 46840398 46841511 PCT