Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1952 ATGTTACAAAATTTGCTACTGTCACAACTACTACTATTACTCCTTTTCTGTCATTTGGCCGTTCAAGCATCAGATCAACATGAAAGAAAGCCATACATTGTATACATGGGAGAACTACAAGCGGGTACAACCTATGCAGTGGAAAGTCACCACCACAACTTGCTAGAGACTGCGATTGGAAACAAGCAGTTAGCCAGACAGTCCAAAATACATAGTTATGGAAAGAGCTTCAACGGATTTGTTGCACGACTTCTGCCAGATGAAGCAGAGAGACTCAAAGAGGAGGACGGTGTGGTTTCTGTGTTTCCAAATAGAGTTCGCCAACTACACACGACAAGGTCGTGGGATTTTCTAGGAATGCCACTAAAAGTGAAGAGAAATTCCATGATAGAAAGTCATATTATTGTGGGCGTGTTGGATACAGGTATTTGGGTTGATTGCCCCAGTTTCAACGATACGGGTTATGGACCTCCTCCTCGTAGATGGAAAGGCAAATGTGTAACGGGAGCAAACTTCACTGGCTGTAACAACAAGGTGATCGGAGCCAACTACTTCAATCTGGAAGACAGCAATTCAACCTACGACAGCATGAGTCCGGCGGACGACGCGGGTCACGGCACTCACACGTCGTCGACCGCGGCGGGCGTAGTGGTGGAAGGCGCTAGTCTGTACGGCGTTGGCAAAGGCACGGCGAGGGGTGGCGTTCCATCTGCCCGCTTGGCTGTGTACAAGGTGTGCTGGACTTCCGGCTGCAGCGACATGGACATGCTCGCGGGCTTCGACCAGGCCATCGCAGACGGCGTCAACTTCCTTTCCGTTTCCATCGGAGGGCCCGCACAGGACTTCCTCACCGACCCAATTGCCATCGGAGCATTCCACGCCATGACTAGAGGGATTCTCACTTCTTGCTCCGCTGGCAACGGCGGCCCTCGCCCCTTGTCCGTTGAGAATGTCGCGCCCTGGATTTTGACGGTAGCTGCTTCCACCACTGATAGACAGTTCATTACAGTTGCTGCTTTCGGTGATGGAAAGAACGCCACAGGAATGTCTATTAATATCTTTTCGCCCAAGAAAAAGATGTATCCATTGACTAGTGGACTCCTTGCTGCTAACCTTTCTGGAGATGGCTATGGCAGTCCTCGGGGTTGTGATTATGGGACTCTAAGCAAGGACAAGGTGAAGGGCAGGATAGTGTACTGCGTTGGGGGAACGGGAACACAGGACTTAACCATCAAAGATCTAGGGGGAGCAGGAACTATCGTAGTTCTTGAAGAGGATATAGACGCCTCCTTCTCCACGGTTATTCCAGCTACGTTTGTTGAAGCCAGTAGTGTGGACGAAACCATTGAAATCTACATCAATTCCACAAAGAATGCTAAAGCCGTTATTTACAAGACAACAACTAAAGACGTCCCTGCTCCATTTCTTGTTTCTTTTTCATCAAGAGGTCCTCAAACGGTCACCCCAAATATTCTCAAGCCTGACTTGGCTGCTCCGGGAGTGGACATACTGGCTGCTTATTCCAATCTGGCATCATTCACAGGGTACCGTGAAGACAATCGTCATGTTGTTTTTAATATATTATCAGGAACATCTATGTCATGTCCACATGTCACTGCAGCAGCTGCCTATGTCAAATCCTTCCACCCTGACTGGAGTCCTGCTGCAATTAAGTCTGCTCTCATGACCACTGCCACTCCCATTAAAATCAGTGATAACTTCACCCTACTGGGATCTGGGTCAGGACAGATTGATCCGGTAAAAGCAGTACATCCTGGTCTGATCTACGACATTGGAGTGGACTCCTATATCTCCTTCCTTTGTAAGGAAGGATTCAACAACACCAACATTGGTATACTAATTGGCGTAAAAAATTTCAACTGCACAACCATTAAGACTGAGCCAGGAACGGACGGAATCAACTACCCCAGCATGCATATCCAACTCATCAGTGCCACTGATAGAATTTCTGCAGTTTTCTATCGGACTGTGACTAATGTAGGATTTGGAAGTTCAACTTACAAGGCTAAAGTTACAGTCCCTGAAGGTCTTTCAGTGAAGGTCATCCCAGATACATTGCATTTTAGCCAATTGCACCAAAAACGGTCATTTAAGGTTGTTCTGAAGGGGCCTCCAATATTGGATGAGGCATTTGTAAAATTTGCATCACTTGAATGGGACGACTCTAAACACACTGTCAGAAGTCCGATACTTGTCTATAAACCAATGCCAGTGTATTGA 2241 0.473 MLQNLLLSQLLLLLLFCHLAVQASDQHERKPYIVYMGELQAGTTYAVESHHHNLLETAIGNKQLARQSKIHSYGKSFNGFVARLLPDEAERLKEEDGVVSVFPNRVRQLHTTRSWDFLGMPLKVKRNSMIESHIIVGVLDTGIWVDCPSFNDTGYGPPPRRWKGKCVTGANFTGCNNKVIGANYFNLEDSNSTYDSMSPADDAGHGTHTSSTAAGVVVEGASLYGVGKGTARGGVPSARLAVYKVCWTSGCSDMDMLAGFDQAIADGVNFLSVSIGGPAQDFLTDPIAIGAFHAMTRGILTSCSAGNGGPRPLSVENVAPWILTVAASTTDRQFITVAAFGDGKNATGMSINIFSPKKKMYPLTSGLLAANLSGDGYGSPRGCDYGTLSKDKVKGRIVYCVGGTGTQDLTIKDLGGAGTIVVLEEDIDASFSTVIPATFVEASSVDETIEIYINSTKNAKAVIYKTTTKDVPAPFLVSFSSRGPQTVTPNILKPDLAAPGVDILAAYSNLASFTGYREDNRHVVFNILSGTSMSCPHVTAAAAYVKSFHPDWSPAAIKSALMTTATPIKISDNFTLLGSGSGQIDPVKAVHPGLIYDIGVDSYISFLCKEGFNNTNIGILIGVKNFNCTTIKTEPGTDGINYPSMHIQLISATDRISAVFYRTVTNVGFGSSTYKAKVTVPEGLSVKVIPDTLHFSQLHQKRSFKVVLKGPPILDEAFVKFASLEWDDSKHTVRSPILVYKPMPVY* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1952 746 Gene3D Peptidase S8/S53 domain 134 603 IPR036852 GO:0004252|GO:0006508
Pvu1g1952 746 Pfam Subtilase family 132 566 IPR000209 GO:0006508|GO:0008236
Pvu1g1952 746 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Pvu1g1952 746 Gene3D - 331 469 - -
Pvu1g1952 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Pvu1g1952 746 Pfam Fibronectin type-III domain 640 739 IPR041469 -
Pvu1g1952 746 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Pvu1g1952 746 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Pvu1g1952 746 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Pvu1g1952 746 CDD PA_subtilisin_like 341 463 - -
Pvu1g1952 746 Gene3D - 607 741 - -
Pvu1g1952 746 ProSiteProfiles Serine proteases, subtilase domain profile. 114 590 - -
Pvu1g1952 746 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 136 146 IPR023827 -
Pvu1g1952 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 741 IPR045051 -
Pvu1g1952 746 PANTHER CUCUMISIN PROTEIN 21 741 - -
Pvu1g1952 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Pvu1g1952 746 CDD Peptidases_S8_3 108 566 IPR034197 -
Pvu1g1952 746 SUPERFAMILY Subtilisin-like 109 594 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1952 Pvu-Chr1 45481000 45484564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1952 11 564 Subtilisin-like Serine Gene Family AT5G03620 60.563 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1952 - - gmx:100793716 1186.79