Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1951 ATGGATGCGGAATCGGAGAAGCGCGCCTCCGCTGCTGTTTCTCGCTCCTCTCTTTATGAACACATGGATCGGCTTGTTGGCACGGAGGAGATGGAAGCGGCAGAGACTCTCGCGCAGTTGGCAATGCGTGACTCTCACTACACGGACAAATGGTGCACCAAACCAAGTGCCATTCCAGAACTTCATCTCTCACCCACTCTTTCCTCTTCCTCTGATCTCTCTCTTCATCTCTCACCGACGACTCTTCACTCTGATCCCTCTATTGACGCCGTGGACCAAGCTATTGCAGGTGAGCAGCTAGATGAAAAAGTACCCACTTCTGCCTCTGTAGAAGCAGAGAGGACTGAGCAGGATAAATGCTCGGAGCACATGGAGGTGGAGCAGGATGCCAATTTATTGCATAACTCAAGTAATCTGGAGGTGGAGCAGGATGCCAATTTATTCCATATCTCAAGTAATATTTTAGGTCGATTCAACAAGCCAAGGAGAATTTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATACGCAGGGTATTGGCCAATAGAGAGTCAGCTAGGCAAACAATTCGACGTAGGCAGGCTCTGTGTGAGGAGTTAACAAATAAAGCTGCCACTTTGGTGGTGGAGAATGAAAGTCTAAAGAAGGAGAAAGATTTGGCTTTGAAAGAGTATCAGTCTTTGGAGATTACAAATAAGTACTTAAAAGCACAAATAGCCAAGTCAATAAACACTGAAGTGGAGAAAACTCCTGTTGAGCCTGAGTCATCTGTGGCTGAGGTAACACCTTCGTCTGGTAATAGTCCATGGTTCCTTTATAACCATTTTCCAGTTCAACATGTATTTTGGCCTTCGCCCCTTCAGCCTACTTATCCAGTTCATCTACCAAATACATCATTTAATTCCGTCATCATTCCATCTATTGCTAATGTTCCATGTTCTTCCGAGTCTGAATCATATCACAAGCAAAATAGCCTTATCAATGATAAACAAACACCAAATCCATTTTACATGTTTCCATGTCCTTGGATATTCCCTTGTCCACAGTTTGCAAATGGACAATCATCACCTTCCTGTAGCCTGAAAGACAAACAAAATAATCTTTCTCTAGGAAAACCTTGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCAAGCCTGGACAGAGGCCAGACTCATTAATAACCCTTCAAGATTTTCTTTGGATGGAGGTGAGAAGATAACAGGATGTCACATTATAGAAAATTATCATGGACCCGCACTTGGTTGTAATGGTCATGCTTCTGCTTTCGAACAAGAAAACGAACGTCAATTACATTCTGCTCCAAACAATAAAGCATCAGTTAATATTGCAGCATCTTCACTTGAACAGAAACAAGAACAGTTCATTTGTCAGGGGAAAAGTCTAGCAGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAGGAATTAACCAAGCAGAAAAGCATCCATAACCGCCACCCCCGAATGCAGTGTTGA 1512 0.4319 MDAESEKRASAAVSRSSLYEHMDRLVGTEEMEAAETLAQLAMRDSHYTDKWCTKPSAIPELHLSPTLSSSSDLSLHLSPTTLHSDPSIDAVDQAIAGEQLDEKVPTSASVEAERTEQDKCSEHMEVEQDANLLHNSSNLEVEQDANLFHISSNILGRFNKPRRILTEEEKEARRIRRVLANRESARQTIRRRQALCEELTNKAATLVVENESLKKEKDLALKEYQSLEITNKYLKAQIAKSINTEVEKTPVEPESSVAEVTPSSGNSPWFLYNHFPVQHVFWPSPLQPTYPVHLPNTSFNSVIIPSIANVPCSSESESYHKQNSLINDKQTPNPFYMFPCPWIFPCPQFANGQSSPSCSLKDKQNNLSLGKPCSSSSSLNTLANVDYQAWTEARLINNPSRFSLDGGEKITGCHIIENYHGPALGCNGHASAFEQENERQLHSAPNNKASVNIAASSLEQKQEQFICQGKSLADAVAAAEARKRRKELTKQKSIHNRHPRMQC* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1951 503 PANTHER G-BOX-BINDING FACTOR 3-RELATED 4 498 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pvu1g1951 503 CDD bZIP_plant_GBF1 174 225 IPR045314 GO:0003700|GO:0006355
Pvu1g1951 503 Pfam bZIP transcription factor 169 229 IPR004827 GO:0003700|GO:0006355
Pvu1g1951 503 Gene3D - 172 225 - -
Pvu1g1951 503 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 4 498 - -
Pvu1g1951 503 SMART brlzneu 169 233 IPR004827 GO:0003700|GO:0006355
Pvu1g1951 503 Coils Coil 182 230 - -
Pvu1g1951 503 SUPERFAMILY Leucine zipper domain 173 227 IPR046347 GO:0003700|GO:0006355
Pvu1g1951 503 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 234 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1951 152 503 bZIP Transcription Factor Family AT1G19490 35.493 9.89e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu1g1951 bZIP_1 1.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1951 - - vra:106757437 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1951 1 45475087 45479683 Pvu1g1951 1 45475087 45479683 ECH