Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g1941 | ATGGACTTGCATCTGAAGCAATGGAGAAACCAGCATGAGTCAGAGGAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCCCATCAACAGCCACAAACACAATCATCTGCCTCTGCACTCCCTTTGTTTGTACCTGAACCCAACAGCAAAGTCAGCACCCTGTCAGATTCAACATTAGCAGCTACTAACAGACTTCCCAGGATGGGGAGCTACTTCAGCTTGTCTCAGTGGCAGGAACTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCCTGAACTCCTTCAACCAATCAAGAAAAGCCTTCTTCATTCCCCTCACTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTTTGCTGCAATCAGGGTACTGGGGTAGAGGAGCGATGGATCCAGAACCAGGGCGGTGCCGGAGAACTGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCTGGGCAAAAGTACTGTGAGCGCCACATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAGTAGTGCTAATTGTGGTGGTAGTGGTGGTGGTGGTGGATCTCAAGGACTAGGTGCTTCATCTTCCATTTCTTCACCGCCGCTAGCTACTGCTTCTCTGAAATCCCCTTTTGATCTTCTTCATCTTAGCGAACGCTCCTCTGGGACCAAGAATGAAGACAAGAGCTTGTTTGAAAACGAAGATCATGTGGGTGGGGATGGCAGAGCAGGTGGGCATATGCTGAGACATTTTTTCGATGATTGGCCAAGATCACTGGAAGACTCTGACAACGTTGAAAACAATGCTGGCCGGATGAACTCGGCCACATGCCTCTCTATTTCTATGCCCGGAAATGCTTCCTCCTCCTCGGATGTATCATTGAAATTGTCCACGGGCTATGGAGAGGACCCGGGCCCAAGAAATGAGAATTTGAATCTCGAGGCAGAGCAACTGCAGTTGAATTGGGCCGGAGGATGGGCCTCGGGTAGTCAAGTGGCTTCAATGGGTGGGCCACTTGCTGAGGCACTCAGATCGTCTACTTCAACTTCATCTCCTACTAGCGTTTTGCATCACTTGCCTCCTGGTTCTGGATCTGAGACCAGCTTCATTAGCGCCTGA | 1161 | 0.5004 | MDLHLKQWRNQHESEEQHSTKMPKLLPESHQQPQTQSSASALPLFVPEPNSKVSTLSDSTLAATNRLPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLLHSPHYFLHHPLQHYQPALLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPSSANCGGSGGGGGSQGLGASSSISSPPLATASLKSPFDLLHLSERSSGTKNEDKSLFENEDHVGGDGRAGGHMLRHFFDDWPRSLEDSDNVENNAGRMNSATCLSISMPGNASSSSDVSLKLSTGYGEDPGPRNENLNLEAEQLQLNWAGGWASGSQVASMGGPLAEALRSSTSTSSPTSVLHHLPPGSGSETSFISA* | 387 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 183 | 215 | - | - | |
Pvu1g1941 | 386 | ProSiteProfiles | QLQ domain profile. | 73 | 108 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 24 | 38 | - | - | |
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 170 | 215 | - | - | |
Pvu1g1941 | 386 | SMART | QLQ_2 | 72 | 108 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Pvu1g1941 | 386 | Pfam | QLQ | 74 | 106 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Pvu1g1941 | 386 | ProSiteProfiles | WRC domain profile. | 141 | 185 | IPR014977 | - | |
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 343 | 386 | - | - | |
Pvu1g1941 | 386 | Pfam | WRC | 142 | 184 | IPR014977 | - | |
Pvu1g1941 | 386 | MobiDBLite | consensus disorder prediction | 355 | 386 | - | - | |
Pvu1g1941 | 386 | PANTHER | GROWTH-REGULATING FACTOR 3 | 11 | 385 | - | - | |
Pvu1g1941 | 386 | PANTHER | - | 11 | 385 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g1941 | Pvu-Chr1 | 45365410 | 45368715 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g1941 | 1 | 373 | GRF Transcription Factor Family | AT3G52910 | 51.777 | 8.66e-96 | 289 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRF | Pvu1g1941 | WRC | 2.4e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g1941 | - | - | gmx:100814842 | 600.127 |