Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1932 ATGGAAATGTCTGCCAGAAGATCCAGCAACTACTCTCTCCTCAACCAAACGCCAGAGGACAATCCGTTGTTCGAATCTCCTTCCGGAGACGGTAAAAACAACAGAAGCAAGTTGGAGAGAGTATCCGATTGGGACTCCGTCGTCGATCACAGACAGGGGAACAGGATCGGGAATTTGTACTCCTCTTTCGGGATGCAGCGACAGTCGAGTGGGAGCAGTTTCGGTGAAAGCTCACTCTCCGGCGAGTTTTACGCTCCCACTATGTCCACTATGGCCCCCGAGGAGACTGACGAATTCAAATTTGGTGAGGTCAGAGGCAGGATTCCAGACGCTGGGGCGGCGATGAGCGGCGGATCCTATGGCAAGAGCGGCGGGTCCTACAGCAAGAGCTGGGCTCAGCAGACTGAGGAGAGTTATCAGTTACAGCTGGCATTGGCTCTTCGACTTTCCTCTGAGGCTACTTGTGCTGATGATCCCAATTTTCTGGATACAGTGCCCCATGAATCATCCTCTTCAAGGGCAACGTGTTCGGCAGAGACAGTGTCCCATAGGTTTTGGGTGAATGGCTGCCTATTATACTTCGACAAAATTCCTGATGGATTTTATCTAATTCATGGAATGGATCCGTATGTATGGACTTTGTGCACTGATCTGCAGGAAAGTGGCCGAATTCCTTCAATAGAGACACTAAAATCTATAGATCCTTCTTCCAAATCTTCACTTGAAGTAATTTTGGTGGACAGACTTTCTGATCCTATCTTAAAAGAATTGCAGAACAAGGTACATGACATTTTTTGTCGTAGCATATCAACAACATATGTTGTAGAACAGCTTGCAAAGCTTGTATTCGATTGTATGGGGGGTTCAGCTTCTGTATGGGAAGACAATCTTTTTCCCATATGGAGGGAGTGCATTAATAATCTAAGAGATCGCTTAGGATCTGTCGTTGTTCCTATTGGCAGCCTATCTACTGGACTTTGCAGGCATCGTGCTGTATTATTCAAAGTGCTAGCTGACACCATTGATTTACCGTGTCGAATTGCAAAGGGCTGTAAATATTGTTCAAGAGAAGATGCCTCATCATGTCTTGTTCGATTTGGCCCTGACAGGGAATACATGGTTGATCTAATTGGAAAGCCGGGTTGCTTATGTGAGCCTGATTCCTTACTGAATGGTCCATCCTCCATCTCATTTTGTTCACCCTTGCACTTTCCAAGACTCAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATTGTGTGTCTACTGAGCTTGTCTTCGATAGTGGTGTTGCAGAACAGTATGAAAGGCAGTACAGGGACAGGAACCCTGGGCCAATTCCAAATGATAACAACAGAAGTTCTCTTGTTCCTCCACAACCACAAGCTTATCGTCCAAGTGCACATAATCGAGGCTCCGAAACATTTAAATCAGGTAACCCTCCACAGAATGTTGTAGAGCCGTCATTGCCAAGCAAGGATTCATTGCCTTTAAAGCATAACCGTCCTGGTCATAGAGATGCACAGACCAGATTACTGATTTCTAGCAAACCATCTAGAGACTTTTCCCTAGATATGGAGGATCTGGACATTCCATGGACTGATCTTGTTTTGAAAGGGAGAATAGGATCAGGTTCTTTTGGAACTGTACATCAAGCTGAGTGGAATGGCTCGGAGGTTGCTGTGAAAATTCTGATGGAACAAGACTTTGCAGGTGAACGCTTCCAGGAATTCTTGAGGGAGGTTGCAATAATGAAAAACTTACGGCATCCAAACATTGTTTTGCTTATGGGTGCAGTCACTAAGCCTCCCAATTTATCAATTGTCACAGAATACTTGTCCAGGGGTAGCTTGTATAGGCTGTTGCATAAACCTGGTGCCACAGAAATGTTGGATGAGAGACGCAGGATTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGAAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTAGTGATTTTGGGCTTTCCCGACTAAAGGCAAACACATTTCTCTCATCCAAGTCAGCTGCTGGGACACCTGAGTGGATGGCTCCAGAAGTTCTTCGTGACGAGCCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGCTCGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCACCACAGGTTGTGGCAGCTGTTGGCTTTAAGGCAAAAAGACTTGAAATACCACGAGATTTAAATCCTCAATTAGCATCAATAATTGAGGCTTGCTGGGCCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGGATTGATCAAACCCCCTATACCTCAACCTGGTCGTCCAAACATGTCATTACCCATTTGA 2454 0.4487 MEMSARRSSNYSLLNQTPEDNPLFESPSGDGKNNRSKLERVSDWDSVVDHRQGNRIGNLYSSFGMQRQSSGSSFGESSLSGEFYAPTMSTMAPEETDEFKFGEVRGRIPDAGAAMSGGSYGKSGGSYSKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDTVPHESSSSRATCSAETVSHRFWVNGCLLYFDKIPDGFYLIHGMDPYVWTLCTDLQESGRIPSIETLKSIDPSSKSSLEVILVDRLSDPILKELQNKVHDIFCRSISTTYVVEQLAKLVFDCMGGSASVWEDNLFPIWRECINNLRDRLGSVVVPIGSLSTGLCRHRAVLFKVLADTIDLPCRIAKGCKYCSREDASSCLVRFGPDREYMVDLIGKPGCLCEPDSLLNGPSSISFCSPLHFPRLKPAEPTIDFRSLAKQYFSDCVSTELVFDSGVAEQYERQYRDRNPGPIPNDNNRSSLVPPQPQAYRPSAHNRGSETFKSGNPPQNVVEPSLPSKDSLPLKHNRPGHRDAQTRLLISSKPSRDFSLDMEDLDIPWTDLVLKGRIGSGSFGTVHQAEWNGSEVAVKILMEQDFAGERFQEFLREVAIMKNLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRISMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVSDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQVVAAVGFKAKRLEIPRDLNPQLASIIEACWANEPWKRPSFSSIMDSLKGLIKPPIPQPGRPNMSLPI* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1932 817 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 119 806 - -
Pvu1g1932 817 CDD STKc_MAP3K-like 549 797 - -
Pvu1g1932 817 Gene3D Transferase(Phosphotransferase) domain 1 622 805 - -
Pvu1g1932 817 ProSitePatterns Protein kinases ATP-binding region signature. 549 570 IPR017441 GO:0005524
Pvu1g1932 817 MobiDBLite consensus disorder prediction 1 45 - -
Pvu1g1932 817 Gene3D Phosphorylase Kinase; domain 1 536 621 - -
Pvu1g1932 817 MobiDBLite consensus disorder prediction 446 515 - -
Pvu1g1932 817 MobiDBLite consensus disorder prediction 452 497 - -
Pvu1g1932 817 Pfam Protein tyrosine and serine/threonine kinase 544 797 IPR001245 GO:0004672|GO:0006468
Pvu1g1932 817 MobiDBLite consensus disorder prediction 1 31 - -
Pvu1g1932 817 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 119 806 - -
Pvu1g1932 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Pvu1g1932 817 Pfam Ethylene-responsive protein kinase Le-CTR1 178 384 - -
Pvu1g1932 817 SMART serkin_6 543 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1932 817 SUPERFAMILY Protein kinase-like (PK-like) 523 796 IPR011009 -
Pvu1g1932 817 ProSiteProfiles Protein kinase domain profile. 543 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1932 817 PRINTS Tyrosine kinase catalytic domain signature 617 630 IPR001245 GO:0004672|GO:0006468
Pvu1g1932 817 PRINTS Tyrosine kinase catalytic domain signature 658 676 IPR001245 GO:0004672|GO:0006468
Pvu1g1932 817 PRINTS Tyrosine kinase catalytic domain signature 705 715 IPR001245 GO:0004672|GO:0006468
Pvu1g1932 817 PRINTS Tyrosine kinase catalytic domain signature 724 746 IPR001245 GO:0004672|GO:0006468
Pvu1g1932 817 PRINTS Tyrosine kinase catalytic domain signature 768 790 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1932 Pvu-Chr1 45174104 45188502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1932 1 813 MAP Kinase Kinase Kinase AT5G03730 63.294 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu1g1932 PK_Tyr_Ser-Thr 1.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1932 K14510 - gmx:100810555 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1932 1 45174104 45188502 Pvu7g2297 7 46296278 46305489 PCT