Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1929 ATGGAGTTTTGGGGTGTTGAAGTGAAAAGTGGACAATCTCTCAAGGTCGATCCAGGAGATGACAAGATTATCCACCTTTCAAATGCATGCCTGGGGGATGTGACTAAGGCTAAAGGAGGTGAACTGGTAGCCCTGAACGTGAAGTTTGGTAACCAGAAGCTTGTGCTTGGAACTCTTTCTTCTGATAAATTTCCTCAAATATCTTATGATTTAATATTTGAGAAGGAATTTGAGCTATCCCATAGCTGGAAAAATGGGAGTGTCTTCTTTACCGGATTCAAAGCTCAATCTCAGTCGGAGTCTGATAATGATGAAGATTCTGACGATTTTGATGAAGATATTCCAGTTAGTGCTGCCAATGGGAAACATGAGTTTAAGGTGAAGAATGGTGTCAAACTTGATGAGGCTAAACAGAAGAAGATAGCAGATCCAAGGAAGAATGAAAAGGCTAAGGAAAAGGATACAAATGTCGAAGATGAAGATTCATCCGAATCTGATGATGATGATGATTCAAGTGAAGATAAGCCCACAGCAAATGGTGACATAGAAAGTAGTGAAGGTGATGAGGATAGTGATGATGATGATGAGGAGGAGGAGGATGAGGATGGTGATGACGATGAATCTGATGAGGAGACACCCAAGAAGATTGAAGAAGGCAATAAGCGGAAGATTGAATCTTCTAAGAAAACACCTGTCCCTGAGAAAAAGGCAAAATTTGTTACTCCTCAGAAGACTGGTTAG 741 0.4076 MEFWGVEVKSGQSLKVDPGDDKIIHLSNACLGDVTKAKGGELVALNVKFGNQKLVLGTLSSDKFPQISYDLIFEKEFELSHSWKNGSVFFTGFKAQSQSESDNDEDSDDFDEDIPVSAANGKHEFKVKNGVKLDEAKQKKIADPRKNEKAKEKDTNVEDEDSSESDDDDDSSEDKPTANGDIESSEGDEDSDDDDEEEEDEDGDDDESDEETPKKIEEGNKRKIESSKKTPVPEKKAKFVTPQKTG* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1929 246 MobiDBLite consensus disorder prediction 213 235 - -
Pvu1g1929 246 Gene3D Nucleoplasmin core domain 1 100 - -
Pvu1g1929 246 MobiDBLite consensus disorder prediction 115 158 - -
Pvu1g1929 246 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Pvu1g1929 246 MobiDBLite consensus disorder prediction 183 212 - -
Pvu1g1929 246 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 245 - -
Pvu1g1929 246 MobiDBLite consensus disorder prediction 98 246 - -
Pvu1g1929 246 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 245 - -
Pvu1g1929 246 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1929 Pvu-Chr1 45123973 45126866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1929 1 94 C2H2 Transcription Factor Family AT5G03740 53.191 8.02e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1929 - - pvu:PHAVU_001G186300g 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1929 1 45123973 45126866 Pvu1g1929 1 45123973 45126866 ECH