Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1920 ATGAAACACTCTTCTTCCATAAACCTGTCACTGGCATTGGCCTTCACCATCCTCTATGTTGCAGATGCTGCATGGCAAAATGATACACTCGCATTATCCCAATTCCGCCTCCAAACCGACACCCACGGCAACCTTCTCTCCAACTGGACCGGAGCGGACGCCTGTTCCGCCGCGTGGCTCGGAGTGGAGTGCTCCCCAAATGGCAGAGTGGTGGGCCTCTCCCTCCCTTCCCTTAACCTCCGTGGCCCAATTGATTCACTTTCCCCACTTCTCTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGTACCGTTTCCCCTCTCTTAAACTGCACTGCCCTCGAACTTCTCTACCTCTCCCACAATGACTTCTCCGGCGATATTCCGCCGCAGATATCTTCCCTCCGCCTCCTCCTCCGCCTTGACATCTCCGACAACAACATCCGCGGTCCAATCCCCAACCAAGTCGCCAAACTAACCCACCTCCTTACTCTTCGGTTACAGAACAACGCCCTCTCCGGCCACGTCCCCGACCTCTCCGCTTCCCTCCTCAACCTCACCCAACTCAACGTAACCAACAATGAACTTCGTGGCCACGTTCCCGATTCCATGCTCGCAAAATTCGGCAACGCCAGCTTCTCCGGAAATCACGCTCTATGTGGATCCACCCCGTTGCCCAAATGTTCCGAAACCGAACCAGATACGGAGACCACAATAACCGTTCCTTCAAAACCGAGCTCGTTCCCTCAAACAAGTAGTGTCACTCTCTCTGACACTCCGAAGAAGAAAGGACTGAGGGCGGGTGTCATAGTGGCGATTGTGGTGGCGGTGCTGGTGACGGTGCTGGTGGCGATGTCATTCGTGGTGGCGCACTGCTGCGCGAGGGGAGGGGAAGGCTATGGGTCGGCGGTGGGGAGCGAGAGTGGGAAGAGGAAGAGTGGGAGTAGTTCTGGGAGCGAGAAGAAGGTGTATGGAAATGGTGGCAACTTCGATAGAGATAGCGATGGGACGAACACCGAGACGGAACGAAGCAAGCTGGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTAGAGCATCGGCGGAGATGCTGGGAAAAGGATGCTTGGGGACGGTTTACAGAGCGGTGCTCGACGATGGGTGCACCGTGGCAGTGAAGAGACTCAAAGACGCAAACCCCTGCGAGAGAAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTGAAACACCCCAACATTGTTAAACTCCGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTGTATGACTACCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGTAACCGTGGACCTGGAAGGATTCCATTGGATTGGACAACGAGAATAAGCTTGGTGTTAGGTGCGGCTAGAGGGTTGGCCAGGATTCATGCAGAGTACAACGCGTCCAAGATACCTCACGGGAACGTCAAATCCTCCAACGTGCTTCTCGACAAAAACGGAGTCGCTTTGATCTCCGACTTCGGGTTATCGCTGCTGTTGAACCCTGTTCACGCGATTGCACGGTTGGGAGGGTACAGAGCGCCGGAACAGGTTGAAGTGAAGAAGCTGTCGCAGGAGGCTGACGTGTACGCTTTCGGGGTGTTGGTGTTGGAGGTGTTGACAGGGAGGTCACCGTCGACACCGTACCCTGGTTCCGCAGCTCGTCCGCGCGTGGAGGATGAGAGTGAGGTGGATCTTCCGAAGTGGGTTGGGTCTGTGGTGAAGGAGGAGTGGACCGCTGAGGTGTTCGACGAGGAGCTGTTGCGGTACAAGAACATCGAGGAGGAGTTGGTAGCGATGTTGCACGTGGGAGTGGCGTGTGTGGCGGCGCAACCGGAGAAGAGGCCGAGTATGTTGGAGGTTGTGAAGATGGTTGAGGATCTGAGGGTGGAACAGTCTCCTCTGGGGGAGGATTATGATGAGGCACGGTCACGCAATTCGCTTTCGCCGTCGCTTCCCACCACCGAAGATGGCCTTGCTTAA 2034 0.5501 MKHSSSINLSLALAFTILYVADAAWQNDTLALSQFRLQTDTHGNLLSNWTGADACSAAWLGVECSPNGRVVGLSLPSLNLRGPIDSLSPLLYLRFLDLHENRLNGTVSPLLNCTALELLYLSHNDFSGDIPPQISSLRLLLRLDISDNNIRGPIPNQVAKLTHLLTLRLQNNALSGHVPDLSASLLNLTQLNVTNNELRGHVPDSMLAKFGNASFSGNHALCGSTPLPKCSETEPDTETTITVPSKPSSFPQTSSVTLSDTPKKKGLRAGVIVAIVVAVLVTVLVAMSFVVAHCCARGGEGYGSAVGSESGKRKSGSSSGSEKKVYGNGGNFDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGCLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVKLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKKLSQEADVYAFGVLVLEVLTGRSPSTPYPGSAARPRVEDESEVDLPKWVGSVVKEEWTAEVFDEELLRYKNIEEELVAMLHVGVACVAAQPEKRPSMLEVVKMVEDLRVEQSPLGEDYDEARSRNSLSPSLPTTEDGLA* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1920 677 MobiDBLite consensus disorder prediction 650 677 - -
Pvu1g1920 677 MobiDBLite consensus disorder prediction 231 262 - -
Pvu1g1920 677 Gene3D Ribonuclease Inhibitor 22 107 IPR032675 -
Pvu1g1920 677 MobiDBLite consensus disorder prediction 301 340 - -
Pvu1g1920 677 MobiDBLite consensus disorder prediction 231 261 - -
Pvu1g1920 677 PANTHER LRR RECEPTOR-LIKE KINASE 6 667 - -
Pvu1g1920 677 SUPERFAMILY L domain-like 26 206 - -
Pvu1g1920 677 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pvu1g1920 677 Gene3D Ribonuclease Inhibitor 108 232 IPR032675 -
Pvu1g1920 677 Pfam Protein kinase domain 368 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1920 677 ProSiteProfiles Protein kinase domain profile. 364 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1920 677 SUPERFAMILY Protein kinase-like (PK-like) 368 642 IPR011009 -
Pvu1g1920 677 Gene3D Phosphorylase Kinase; domain 1 334 439 - -
Pvu1g1920 677 Gene3D Transferase(Phosphotransferase) domain 1 440 663 - -
Pvu1g1920 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 667 - -
Pvu1g1920 677 CDD STKc_IRAK 370 645 - -
Pvu1g1920 677 MobiDBLite consensus disorder prediction 310 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1920 Pvu-Chr1 45035725 45038218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1920 26 673 Receptor kinase-like Gene Family AT2G36570 65.367 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu1g1920 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1920 - - gmx:100808402 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1920 1 45035725 45038218 Pvu7g2305 7 46423755 46426372 PCT