Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g1920 | ATGAAACACTCTTCTTCCATAAACCTGTCACTGGCATTGGCCTTCACCATCCTCTATGTTGCAGATGCTGCATGGCAAAATGATACACTCGCATTATCCCAATTCCGCCTCCAAACCGACACCCACGGCAACCTTCTCTCCAACTGGACCGGAGCGGACGCCTGTTCCGCCGCGTGGCTCGGAGTGGAGTGCTCCCCAAATGGCAGAGTGGTGGGCCTCTCCCTCCCTTCCCTTAACCTCCGTGGCCCAATTGATTCACTTTCCCCACTTCTCTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGTACCGTTTCCCCTCTCTTAAACTGCACTGCCCTCGAACTTCTCTACCTCTCCCACAATGACTTCTCCGGCGATATTCCGCCGCAGATATCTTCCCTCCGCCTCCTCCTCCGCCTTGACATCTCCGACAACAACATCCGCGGTCCAATCCCCAACCAAGTCGCCAAACTAACCCACCTCCTTACTCTTCGGTTACAGAACAACGCCCTCTCCGGCCACGTCCCCGACCTCTCCGCTTCCCTCCTCAACCTCACCCAACTCAACGTAACCAACAATGAACTTCGTGGCCACGTTCCCGATTCCATGCTCGCAAAATTCGGCAACGCCAGCTTCTCCGGAAATCACGCTCTATGTGGATCCACCCCGTTGCCCAAATGTTCCGAAACCGAACCAGATACGGAGACCACAATAACCGTTCCTTCAAAACCGAGCTCGTTCCCTCAAACAAGTAGTGTCACTCTCTCTGACACTCCGAAGAAGAAAGGACTGAGGGCGGGTGTCATAGTGGCGATTGTGGTGGCGGTGCTGGTGACGGTGCTGGTGGCGATGTCATTCGTGGTGGCGCACTGCTGCGCGAGGGGAGGGGAAGGCTATGGGTCGGCGGTGGGGAGCGAGAGTGGGAAGAGGAAGAGTGGGAGTAGTTCTGGGAGCGAGAAGAAGGTGTATGGAAATGGTGGCAACTTCGATAGAGATAGCGATGGGACGAACACCGAGACGGAACGAAGCAAGCTGGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTAGAGCATCGGCGGAGATGCTGGGAAAAGGATGCTTGGGGACGGTTTACAGAGCGGTGCTCGACGATGGGTGCACCGTGGCAGTGAAGAGACTCAAAGACGCAAACCCCTGCGAGAGAAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTGAAACACCCCAACATTGTTAAACTCCGAGCTTATTACTATGCCAAGGAAGAAAAGCTTCTTGTGTATGACTACCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGTAACCGTGGACCTGGAAGGATTCCATTGGATTGGACAACGAGAATAAGCTTGGTGTTAGGTGCGGCTAGAGGGTTGGCCAGGATTCATGCAGAGTACAACGCGTCCAAGATACCTCACGGGAACGTCAAATCCTCCAACGTGCTTCTCGACAAAAACGGAGTCGCTTTGATCTCCGACTTCGGGTTATCGCTGCTGTTGAACCCTGTTCACGCGATTGCACGGTTGGGAGGGTACAGAGCGCCGGAACAGGTTGAAGTGAAGAAGCTGTCGCAGGAGGCTGACGTGTACGCTTTCGGGGTGTTGGTGTTGGAGGTGTTGACAGGGAGGTCACCGTCGACACCGTACCCTGGTTCCGCAGCTCGTCCGCGCGTGGAGGATGAGAGTGAGGTGGATCTTCCGAAGTGGGTTGGGTCTGTGGTGAAGGAGGAGTGGACCGCTGAGGTGTTCGACGAGGAGCTGTTGCGGTACAAGAACATCGAGGAGGAGTTGGTAGCGATGTTGCACGTGGGAGTGGCGTGTGTGGCGGCGCAACCGGAGAAGAGGCCGAGTATGTTGGAGGTTGTGAAGATGGTTGAGGATCTGAGGGTGGAACAGTCTCCTCTGGGGGAGGATTATGATGAGGCACGGTCACGCAATTCGCTTTCGCCGTCGCTTCCCACCACCGAAGATGGCCTTGCTTAA | 2034 | 0.5501 | MKHSSSINLSLALAFTILYVADAAWQNDTLALSQFRLQTDTHGNLLSNWTGADACSAAWLGVECSPNGRVVGLSLPSLNLRGPIDSLSPLLYLRFLDLHENRLNGTVSPLLNCTALELLYLSHNDFSGDIPPQISSLRLLLRLDISDNNIRGPIPNQVAKLTHLLTLRLQNNALSGHVPDLSASLLNLTQLNVTNNELRGHVPDSMLAKFGNASFSGNHALCGSTPLPKCSETEPDTETTITVPSKPSSFPQTSSVTLSDTPKKKGLRAGVIVAIVVAVLVTVLVAMSFVVAHCCARGGEGYGSAVGSESGKRKSGSSSGSEKKVYGNGGNFDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGCLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVKLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKKLSQEADVYAFGVLVLEVLTGRSPSTPYPGSAARPRVEDESEVDLPKWVGSVVKEEWTAEVFDEELLRYKNIEEELVAMLHVGVACVAAQPEKRPSMLEVVKMVEDLRVEQSPLGEDYDEARSRNSLSPSLPTTEDGLA* | 678 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g1920 | 677 | MobiDBLite | consensus disorder prediction | 650 | 677 | - | - | |
Pvu1g1920 | 677 | MobiDBLite | consensus disorder prediction | 231 | 262 | - | - | |
Pvu1g1920 | 677 | Gene3D | Ribonuclease Inhibitor | 22 | 107 | IPR032675 | - | |
Pvu1g1920 | 677 | MobiDBLite | consensus disorder prediction | 301 | 340 | - | - | |
Pvu1g1920 | 677 | MobiDBLite | consensus disorder prediction | 231 | 261 | - | - | |
Pvu1g1920 | 677 | PANTHER | LRR RECEPTOR-LIKE KINASE | 6 | 667 | - | - | |
Pvu1g1920 | 677 | SUPERFAMILY | L domain-like | 26 | 206 | - | - | |
Pvu1g1920 | 677 | Pfam | Leucine rich repeat N-terminal domain | 27 | 65 | IPR013210 | - | |
Pvu1g1920 | 677 | Gene3D | Ribonuclease Inhibitor | 108 | 232 | IPR032675 | - | |
Pvu1g1920 | 677 | Pfam | Protein kinase domain | 368 | 640 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g1920 | 677 | ProSiteProfiles | Protein kinase domain profile. | 364 | 645 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g1920 | 677 | SUPERFAMILY | Protein kinase-like (PK-like) | 368 | 642 | IPR011009 | - | |
Pvu1g1920 | 677 | Gene3D | Phosphorylase Kinase; domain 1 | 334 | 439 | - | - | |
Pvu1g1920 | 677 | Gene3D | Transferase(Phosphotransferase) domain 1 | 440 | 663 | - | - | |
Pvu1g1920 | 677 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 6 | 667 | - | - | |
Pvu1g1920 | 677 | CDD | STKc_IRAK | 370 | 645 | - | - | |
Pvu1g1920 | 677 | MobiDBLite | consensus disorder prediction | 310 | 325 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g1920 | Pvu-Chr1 | 45035725 | 45038218 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g1920 | 26 | 673 | Receptor kinase-like Gene Family | AT2G36570 | 65.367 | 0.0 | 834 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Pvu1g1920 | Pkinase | 2.1e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g1920 | - | - | gmx:100808402 | 1110.13 |