Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1917 ATGGAACCCAATGCATTAGGTGGTGGAATATTTCCTAACATAAGTAGTGGTTTGCTAGGAGTAGAAAAGCTTCAAAACCAGCAAAACCCTCCTCACCCTTTGCACCACCCCCAAATGGTTTCCTATGCCTCTCACCATGACACTGACACACATCAACAACATCCACCACAATCAATCAAACATGGCTACAACTATTCTGCCGCGAAAACCAACAAGTTACAAATCACACTCAGTGATGAAGATGAGGCCGGGTTCACAGCAGAAGACTCTGGTGACCCCAAGAGAAAAATGTCTCCATGGCATAGAATGAAGTGGACTGACACCATGGTAAGGCTTTTAATAATGGCTGTTTATTACATTGGAGATGAGGCTGGTTCAGAAGGCAGTGATCCCACTAAGAAGAAAGCCACGGGGTTGCTGCAGAAGAAAGGGAAATGGAAATCAGTGTCAAGGGGCATGATGGAAAAGGGCTACTATGTATCTCCGCAACAATGCGAAGACAAATTCAATGACTTGAACAAGAGGTACAAGAGGGTCAACGACATTCTGGGCAAGGGCACAGCTTGTCGGGTGGTGGAGAACCAAACCTTGTTGGACACAATGGATCTGTCCCCAAAGATGAAGGAGGAAGTTCGAAAACTGCTCAACTCCAAGCACTTGTTCTTCAGGGAAATGTGTACCTACCACAACAGTTGTGGCCACAACAACAATTGTGGCACATCCAACGCGCAACAATCAAGTGAGGCTCAACCACAACATCAACATCAACATCAACATCAACAGCAGCGGTGTTTGCATTCATCGGAGAACGGGGTGGGGGGTCTGAGAATGTTGAAAGAGGATGAGGATGAGGATATTGAGGAGGAGGATTCGGAGGATTTTTCTGATGAGGAGGAAGATGAATCGGGAGAAGGAGGATCAAGGGGTATGGAGGAGGATGAGAATGATGTGATGAGGAAGAGAGCGAGGAAAGGAGGGTTTGGTGTGTTGTCATCCTCATCATCCGTATCATGTCAGGTGATGATGCAGCAATTGAATGGCGAAGTGAGCGGTGTGTTGCAAGATGTTGCGAAAAGTGCATGGGAGAAAAAGCATTGGATGAAGAAGAGGGTGGTGCAGTTGGAGGAGCAGCAGGTGAATTATCATATGCAGGCCTTTGAATTGGAAAAGCAACGGTTGAAGTGGGAGAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAAAGATAAGCTTCAGAATGAACGGAGGAGGCTGGAAATCGAAAGAATGCTCTTGCTAATTCGCCAGAAGGAGCTTGAACTGGTTACTGTTCATCAACAGCAGCAGCATCAGCAGCAGCATTCTTCTACCTAG 1353 0.4664 MEPNALGGGIFPNISSGLLGVEKLQNQQNPPHPLHHPQMVSYASHHDTDTHQQHPPQSIKHGYNYSAAKTNKLQITLSDEDEAGFTAEDSGDPKRKMSPWHRMKWTDTMVRLLIMAVYYIGDEAGSEGSDPTKKKATGLLQKKGKWKSVSRGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSPKMKEEVRKLLNSKHLFFREMCTYHNSCGHNNNCGTSNAQQSSEAQPQHQHQHQHQQQRCLHSSENGVGGLRMLKEDEDEDIEEEDSEDFSDEEEDESGEGGSRGMEEDENDVMRKRARKGGFGVLSSSSSVSCQVMMQQLNGEVSGVLQDVAKSAWEKKHWMKKRVVQLEEQQVNYHMQAFELEKQRLKWERFSSKKEREMEKDKLQNERRRLEIERMLLLIRQKELELVTVHQQQQHQQQHSST* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1917 450 MobiDBLite consensus disorder prediction 281 307 - -
Pvu1g1917 450 MobiDBLite consensus disorder prediction 241 268 - -
Pvu1g1917 450 MobiDBLite consensus disorder prediction 241 316 - -
Pvu1g1917 450 Pfam Myb/SANT-like DNA-binding domain 102 226 IPR044822 -
Pvu1g1917 450 PANTHER F16F4.11 PROTEIN-RELATED 1 450 - -
Pvu1g1917 450 Gene3D - 105 178 - -
Pvu1g1917 450 Coils Coil 401 428 - -
Pvu1g1917 450 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1917 Pvu-Chr1 45016840 45018779 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu1g1917 Myb_DNA-bind_4 1.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1917 - - gmx:100808934 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1917 1 45016840 45018779 Pvu1g1917 1 45016840 45018779 ECH
Pvu1g1917 1 45016840 45018779 Pvu7g2308 7 46446750 46448842 PCT