Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1907 ATGCAAATGATAGCTGAATCAAACATGAGACCCTGCTTCCATTTTTGCTATTCCTACACCTTTCTTCTTCTTTTCCTTCTCCTTGCCCATCACACTACTTCACAGAAGACTTGTCCAAACTGTGGCTCTATGCAAGTTCCATACCCTTTGAGTACACATCCAAGTTGTGGTGATCCATACTACAAGCTTCGTTGTGATTCCCACTCTCAAAGGCTTTACTTCGACACCCTCAATGGAAGTTCCTATCTCCTTCTGAGGATCATGCCTTCAATCCAGCGCATGGTGGTAGAGCCATCACCTTGGTTACCAGGTTCGTGTGTTACACAAGACATGCAAAGAAGCAATGGTATATGGTTGAACCAGTCACTTCCTTTCAATATAACTTCATCCAATACAGTGTTCCTCCTTAATTGCTCCCCACGCCTCTTGGTTTCTCCTCTTAACTGCACTTCTTCTAGTGTTTGCCATCGTTACTTGGGGAGTTCAGGTCACGTTGACACAAAGCGAGCACTTGAGTGTGCAAGTGGTCTTCACCCTTGTTGCACTTTTCTAGCTGGTGGGATACCTTCAGCTTACAGGATCAGGCTTCATGATTCTGGCTGTAAAGCATTCAGAAGCATTCTTCATTTGAACCAAGACAAGCCTCCTAATCAGTGGGAGGAAGGGCTTGAAATTCAATGGGCTCCTCCACCTGAACCAGTGTGCAGGACACAAACGGATTGCTCTGGAGACTCTACGTGTTCCCCTTCTGGTACAAATGGCTTATTTCGCTGCCTTTGTAATGCGGGACACCGTTGGGACCCTTTTTTCACAACGTGTGTGAGGTATCAGAGAAAACCCAAATGGAAAACCAGCTTGGTGGTCTCGATAGGGGTTGTTGTTACTTTTTTCTCTCTTGTTGTGATTCTGAGCATCATCACAAAGTCCCGCAAAATCTCAACCTATAGAGATAACAAAGCGAAGGAAAGAGAAGACAAGCTGAAATCAAGTGCTGGGGAGAAGCCTTGTAGGATGTTTCAACTGAAAGAGGTGAAGAAAGCAACAAATGGTTTTTCCCAACAGAGGTTCTTGGGGAGTGGTGGCTTTGGGGAAGTTTACAAAGGTGAGCTACAAGATGGAACATTAGTGGCAGTGAAGAAAGCTAGAGTGGGAAACCTGAAAAGCACCCAACAAGTGCTTAATGAGGTTGCAATACTTTCTCAAGTCAATCACAAGAACTTGGTGAGGCTCTTGGGGTGCTGTGTGGAATCTGAGCTACCATTTATGATCTACGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCACGGTAGGTATTGTTCCAACTTTCTAAACTGGAAAACAAGGCTCAAGGTTGCTTTTCAAACTGCAGAAGCATTGGCCTACCTGCATTCTGCTGCACACACTCCCATCTACCATAGAGATGTTAAGTCAACAAACATACTATTGGATGATGATTTCAATGCCAAGGTCTCAGATTTTGGACTCTCCAGATTGGCTAGCCCGGGACTCAGTCACGTGTCAACATGTGCTCAGGGAACGTTGGGGTACTTGGATCCTGAATACTACCGCAACTACCAGTTAACAGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGCTTTTGACTTCACAGAAAGCCATTGACTTCAATCGTGATGAAGATGATGTCAACCTAGCAATTCATGTGAATCAACGTGCGAGCAATGGTAATATCATGGAATTGGTGGATCAAAGGCTTCTTTCCGTGGAGACCTTGGAGGATAAAATCTTCACAAGCATAACACTCTTCTTGGAGCTTGCACTTGAATGTCTGAGAGAGAAGAAAGGTGAAAGGCCTAGTATGAAGGATATTGTTCAACGCCTAGTCTGCATAATTAGGATTGTAGAACAAGAGTGA 1911 0.4422 MQMIAESNMRPCFHFCYSYTFLLLFLLLAHHTTSQKTCPNCGSMQVPYPLSTHPSCGDPYYKLRCDSHSQRLYFDTLNGSSYLLLRIMPSIQRMVVEPSPWLPGSCVTQDMQRSNGIWLNQSLPFNITSSNTVFLLNCSPRLLVSPLNCTSSSVCHRYLGSSGHVDTKRALECASGLHPCCTFLAGGIPSAYRIRLHDSGCKAFRSILHLNQDKPPNQWEEGLEIQWAPPPEPVCRTQTDCSGDSTCSPSGTNGLFRCLCNAGHRWDPFFTTCVRYQRKPKWKTSLVVSIGVVVTFFSLVVILSIITKSRKISTYRDNKAKEREDKLKSSAGEKPCRMFQLKEVKKATNGFSQQRFLGSGGFGEVYKGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESELPFMIYEYISNGTLYDHLHGRYCSNFLNWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDDFNAKVSDFGLSRLASPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFNRDEDDVNLAIHVNQRASNGNIMELVDQRLLSVETLEDKIFTSITLFLELALECLREKKGERPSMKDIVQRLVCIIRIVEQE* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1907 636 Gene3D Transferase(Phosphotransferase) domain 1 427 635 - -
Pvu1g1907 636 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 28 636 - -
Pvu1g1907 636 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Pvu1g1907 636 SUPERFAMILY Protein kinase-like (PK-like) 329 627 IPR011009 -
Pvu1g1907 636 Gene3D Phosphorylase Kinase; domain 1 311 426 - -
Pvu1g1907 636 Pfam Protein kinase domain 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1907 636 CDD STKc_IRAK 357 626 - -
Pvu1g1907 636 ProSiteProfiles Protein kinase domain profile. 351 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1907 636 SMART serkin_6 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1907 636 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 636 IPR045274 GO:0007166
Pvu1g1907 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1907 Pvu-Chr1 44925425 44927771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1907 20 636 Receptor kinase-like Gene Family AT5G02070 46.330 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu1g1907 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1907 - - vra:106757280 1206.05