Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1898 ATGACATATTTGAAGGAATTGCCAGAAGGTAATTGGCTTTGTTGCAATGATTGCACACAAATACATTGTACTTTGGAGAACCTCTTGGTTAGGGGGGCTGAGAGACTTCCAGAATCTCTTTTGGGTGTTATAAAGGAGAAGCAAGGAGAAAAAGGATTAGAACCCATCAATGATATCGATGCTGTTTCAATCTTTCATGAATGCTTTAATCCAATAGTTGATGCATCTAGTGGGCGTAACCTTATTCCAGCCATGCTTTATATGGGAGGAATGTGCGTGATCAGGAGTTTGGAGGAATGTATTGGCTACTTCCAAACACTCTTCTCCTGCATCGAGAGGCTGCTCGCTTTTTTGAATGTGAAGAACCTTGTTCTGCCAGCTGCAGAAGAGGCAGAATCCATATGCACGGATAAATTTGTGTTTAGCAAGATCAAACAAGATCAGCTTACCAACTACAGAAGGACCTGCAATCAGATAGTAAGTTTCAAGGGGACAAATATGCTGCATAAAATGGTGCCTCCCTGTCGGATTATCAATAATCAATCATGA 549 0.4117 MTYLKELPEGNWLCCNDCTQIHCTLENLLVRGAERLPESLLGVIKEKQGEKGLEPINDIDAVSIFHECFNPIVDASSGRNLIPAMLYMGGMCVIRSLEECIGYFQTLFSCIERLLAFLNVKNLVLPAAEEAESICTDKFVFSKIKQDQLTNYRRTCNQIVSFKGTNMLHKMVPPCRIINNQS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1898 182 PANTHER AUTOIMMUNE REGULATOR 101 178 - -
Pvu1g1898 182 PANTHER AUTOIMMUNE REGULATOR 1 88 - -
Pvu1g1898 182 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 88 - -
Pvu1g1898 182 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 101 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1898 Pvu-Chr1 44786992 44789355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1898 4 179 PHD Transcription Factor Family AT2G36720 40.171 7.72e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1898 - - pvu:PHAVU_001G183200g 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1898 1 44786992 44789355 Pvu7g2330 7 46633601 46645072 PCT
Pvu7g2130 7 44617773 44622051 Pvu1g1898 1 44786992 44789355 PCT