Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1870 ATGAAAAGTCTCAGCTACCATGTTATCACCGGGCGTTGGTTCATGCTATTTGCATCTTTACTTATCATGTCCGTCGCTGGGGCAACCTATATGTTTGCAATATACTCTAACGAGGTCAAAACCTCTTTGGGGTACGACCAGTCCACTCTCAACTTGCTCAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCATATCTGGGTTGGTCAACGAGATAACACCACCCTGGGTGGTACTCTCAATAGGGGTCCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAGACCTTTGCCAACACTGGTGCTTTAGTCACATGTGTCAAGAACTTCCCAGAGAGCCGTGGCAGTCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGTGCCATCATCACACAGCTCTACCATGCCTTCTATGGTGATCACAACCCTCAGGCCCTTATCTTACTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGAATATTCAACACAGTCCACCAACCTAAGAACAACAGAGTTTTCTACCACCTTCTATACATTTCACTTTGCCTTGCAGGGCTTCTCATGGTTTTGATACTTGTACAAAACAAGCTTAGTTTTTCCAGGATTGAGTACACAGTTGATGGCCTTGTTGTCTTCTCCTTTCTTCTTCTCCCACTCGCTGTGGTATTCCGAGAGGAGGTAAACCATTTAAAAGCCAAAACGCAAGGTTTGACCGATTCAGCACCCGAGTTGAAAGTAGTCACTGAAGTTACTCCACCTCCTATCGTGGAGCAAGAAGTACTATCAACTAGCACAAGTTCACCCGAGAAAATTTCTTGTTTCAGGAACGTACTCAATCCCCCGAAGAGGGGAGAAGACTACACCATTTTACAAGCACTTTTCAGTATGGACATGCTGACTTTGTTCGTTGCAACAACCTTTGGGGCTGGCGGAACATTAACTGCCATAGACAACCTAGGACAGATTGGGAATTCATTGGGCTACCCGAGTAAGAGCACGACAACCTTTGTGTCCTTGGTGAGCATATGGAACTACTTAGGAAGAGTAGCTGCAGGTTATGGCTCTGAAGTCCTCTTAGCCAAATACAAAGTTCCTCGTCCTTACATGGTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGCCATATTCTCATAGCCCTTGGCATCCCAAACTCTCTCTACTTGTCTTCGGTGATTATTGGGTTTTGTTTTGGAGCTCAGTGGCCACTGATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTATACAACTTAGGAGGCGCAGCAAGCCCTGTTGGATCTTACATTCTAAACGTGAAAGTGGCAGGTATTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGACTGATGAGAGAAGCAGGGAAGGACCTAACTTGTGTAGGAGTGCAATGCTACAGAATGGCTTTTATCATAATCACAGCTTCAACGTTGGTTGGGTGTTTAGCCTCGTTCATTTTGGCGCTGAGGACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTTAGAACGGAACATGAAACAACAGAGAATGAGATGGAGATTACAAAGACCGGTGTTAGATGTTCTGGTTGA 1722 0.4437 MKSLSYHVITGRWFMLFASLLIMSVAGATYMFAIYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVISGLVNEITPPWVVLSIGVLMNFFGYFMIWLAVSGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPESRGSLLGLLKGYVGLSGAIITQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHQPKNNRVFYHLLYISLCLAGLLMVLILVQNKLSFSRIEYTVDGLVVFSFLLLPLAVVFREEVNHLKAKTQGLTDSAPELKVVTEVTPPPIVEQEVLSTSTSSPEKISCFRNVLNPPKRGEDYTILQALFSMDMLTLFVATTFGAGGTLTAIDNLGQIGNSLGYPSKSTTTFVSLVSIWNYLGRVAAGYGSEVLLAKYKVPRPYMVTLVLLLSCVGHILIALGIPNSLYLSSVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGGAASPVGSYILNVKVAGILYDKEALKQLKAKGLMREAGKDLTCVGVQCYRMAFIIITASTLVGCLASFILALRTRKFYKGDIYRKFRTEHETTENEMEITKTGVRCSG* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1870 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 568 - -
Pvu1g1870 573 PANTHER MFS TRANSPORTER 1 568 - -
Pvu1g1870 573 SUPERFAMILY MFS general substrate transporter 13 545 IPR036259 -
Pvu1g1870 573 CDD MFS_Mch1p_like 11 529 - -
Pvu1g1870 573 Pfam Nodulin-like 12 258 IPR010658 -
Pvu1g1870 573 Gene3D MFS general substrate transporter like domains 322 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1870 Pvu-Chr1 44498041 44500036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1870 1 554 Nodulin-like Gene Family AT2G39210 64.591 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1870 - - gmx:100797779 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1870 1 44498041 44500036 Pvu7g0251 7 1800944 1803088 ECH
Pvu1g1870 1 44498041 44500036 Pvu1g1870 1 44498041 44500036 ECH
Pvu1g1870 1 44498041 44500036 Pvu7g1553 7 37222709 37225435 PCT