Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1855 ATGGGTAAAACATGTACAACTTGTTCTTGGGGACTGTGGATGGGAGGGCTCGGAGTACTGGTGCCTGTGATGAGGAAAATACAAACCTCTTTCTCACGTTCAAAAGGGGTGAAGCAGGGCCATTTTGTGGTGATTGCAACTCAAGGGTGGAAGCCAGAGAGATTCTTTATTGAATTGGGGTATTTGGATCACCCTGACTTTGTGAAGTTGTTAAAGCAAGCTGAAGAAGAGTTCGGGTTCTCTCAGGTGGGAGCACTTGCAATTCCATGCGAACCTGATGAACTTAAGAGAATCATTGGAAGGGAAAAGAATAGGAATTGCATGAGACTTGCCTTCTAA 339 0.4484 MGKTCTTCSWGLWMGGLGVLVPVMRKIQTSFSRSKGVKQGHFVVIATQGWKPERFFIELGYLDHPDFVKLLKQAEEEFGFSQVGALAIPCEPDELKRIIGREKNRNCMRLAF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1855 112 Pfam Auxin responsive protein 32 99 IPR003676 GO:0009733
Pvu1g1855 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 106 IPR003676 GO:0009733
Pvu1g1855 112 PANTHER SMALL AUXIN-UP RNA-RELATED 13 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1855 Pvu-Chr1 44300036 44300568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1855 37 100 Calmodulin-binding Proteins AT4G34750 42.188 9.73e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1855 - K14488 gmx:100795119 172.94