Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1850 ATGGTTTTATATGAGCATTCAGATGTTTTTCAGTGGGGTCTTAATCTCCTTGATGGTGACCCTGCTTATAGTCCTGGATACTATGGCCACATAATTCAACATGATACTGGAGATATCTATAATGGACACTACTTCCATAGCCATTATGATAATGAATGTAACCATGTAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCAGGATATTTACAGGAAGGTGAACAACAGTTCCATGTTCCTGAGACTCAGCCTGCATATGATTGGCATAACTCTTCAATGATGAACTACTGTTCAGGAGATGCAGATCATGATTATGCCCAAGAAGGAGTTGGTGATGGAGAACCCTCTAGTTCATGTTCTAGTCCTTGTGAAACAGAGGAATATTCATTAGAGCTAACTGACAATTATCCACTTGATGATGAAGTTGGGAGGAGATTGAGTCAAATGATACCGATTCCTCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCACAAAGTACAAGGTGACGGTAATTGTCAGTTTCGAGCACTGTCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTGAATCAGCTTAAATCTAATCCAGAGATTTATGATGGATATGTTCCCATGGAATATGATGATTATTTGGACAAGATGTCTAAGAATGGCGAATGGGGTGATCATGTTACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAACCCAAAAGGAGTGATTTTCCTGAGTTTCTGGGCAGAGGTACACTACAACTCGATTTATCCCCAAGGAGATATAACATCAAATGAGTCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1026 0.3986 MVLYEHSDVFQWGLNLLDGDPAYSPGYYGHIIQHDTGDIYNGHYFHSHYDNECNHVENDEIIARTLQEEFSQLEIAESSGYLQEGEQQFHVPETQPAYDWHNSSMMNYCSGDADHDYAQEGVGDGEPSSSCSSPCETEEYSLELTDNYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHKVQGDGNCQFRALSDQLYHAPDHHKFVRRQVVNQLKSNPEIYDGYVPMEYDDYLDKMSKNGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFENPKGVIFLSFWAEVHYNSIYPQGDITSNESRKKKRWWSFGSKH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1850 341 ProSiteProfiles OTU domain profile. 196 320 IPR003323 -
Pvu1g1850 341 SUPERFAMILY Cysteine proteinases 182 320 IPR038765 -
Pvu1g1850 341 Gene3D - 177 326 - -
Pvu1g1850 341 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 337 - -
Pvu1g1850 341 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 25 337 - -
Pvu1g1850 341 Pfam OTU-like cysteine protease 202 288 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1850 Pvu-Chr1 44239484 44244361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1850 - - aip:107648617 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1850 1 44239484 44244361 Pvu7g0994 7 10225581 10233194 ECH
Pvu1g1850 1 44239484 44244361 Pvu1g1850 1 44239484 44244361 ECH
Pvu7g1541 7 36862603 36867513 Pvu1g1850 1 44239484 44244361 ECH
Pvu1g1850 1 44239484 44244361 Pvu7g1541 7 36862603 36867513 PCT