Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1849 ATGAAGTGTTTTACATTCTCCTATGGAGAGAAGAAAGATGAGCCCAAAGGCTTTAGGTCAACATCGGGCCCGTCAGAGAATTCCACGTGTGCTGATATTAGAAGATCTGGTTCCGAGTTAAATTCTCTAGAAGCTTCAGACAGTGGCAGCACAGAATCCCTCAGGAGGAATGCAATGCCCAGTTTGTCCCAGAGGCCCAGCAACCTCAGAGTTTTTACTGTTTCTGAACTGAAATCAGCCACAAGGAATTTCAGTCGCTCTGTTAAGATTGGAGAGGGCGGATTTGGGTGTGTCTACCTGGGATTGATTAAAAGTGTGGAGGTCCCCTCTGGAAAAAGTGAAGTTGCAATTAAACAGCTTAGTAAAAGGGGAATGCAGGGGCACAGGGAATGGGTGACAGAAGTGAATGTCCTGGGCGTTGTTGAGCATCCGAATCTTGTGAAACTAGTGGGTTATTGTGCAGAAGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCCCACCGATCAGAGGCTCCTCTTTCATGGAGTAGGAGATTGAAAATAGCTCGAGATGCAGCTCGTGGATTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGAACAATGGAATGCAAAGCTGTCAGACTTTGGGTTGGCAAGGCTGGGACCATCAGATGGACTGACTCATGTCTCAACCGCGGTTGTGGGAACAATGGGATATGCATCTCCGGAATATATTCAAACTGGACGTCTAACATCAAAGAATGATGTGTGGAGCTACGGTGTCTTCCTTTATGAACTTATCACCGGTAGGCGCCCTTTAGATCGAAATCGCCCCAGGGGTGAGCAGAAGCTCTTGGAATGGATAAGACCATACTTATCAGATGGGAAGAAATTTCAACTAATATTAGACCCAAGACTTGATAAGAAACAAATATTCAAATCAGCCCATAGACTTTCTATGATAGCAAACCGATGCTTGGTAAAAAATCCAAAGAATCGCCCAAAGATGAGTGAGGTATTGGAAATGGTGAATGGGATGGTAGAATATTCTTCATCCCGTTCTAGTCCACCATTGCCCTTGAGGAGTGTGGCAAGAGTGGAAACTTCCCAGGAGACTGAAACAAATAACAAGAAACGGACCATGGATCAGAAGCCTGGAGAAAGTAATTGGTTTGTTAGGATGTGGAGACCAAAGCTTCTAAGAACATGTTGA 1278 0.4374 MKCFTFSYGEKKDEPKGFRSTSGPSENSTCADIRRSGSELNSLEASDSGSTESLRRNAMPSLSQRPSNLRVFTVSELKSATRNFSRSVKIGEGGFGCVYLGLIKSVEVPSGKSEVAIKQLSKRGMQGHREWVTEVNVLGVVEHPNLVKLVGYCAEDDERGIQRLLIYEYMPNRSVEHHLSHRSEAPLSWSRRLKIARDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYASPEYIQTGRLTSKNDVWSYGVFLYELITGRRPLDRNRPRGEQKLLEWIRPYLSDGKKFQLILDPRLDKKQIFKSAHRLSMIANRCLVKNPKNRPKMSEVLEMVNGMVEYSSSRSSPPLPLRSVARVETSQETETNNKKRTMDQKPGESNWFVRMWRPKLLRTC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1849 425 MobiDBLite consensus disorder prediction 1 62 - -
Pvu1g1849 425 ProSiteProfiles Protein kinase domain profile. 84 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1849 425 CDD STKc_IRAK 90 368 - -
Pvu1g1849 425 ProSitePatterns Protein kinases ATP-binding region signature. 90 118 IPR017441 GO:0005524
Pvu1g1849 425 SUPERFAMILY Protein kinase-like (PK-like) 60 365 IPR011009 -
Pvu1g1849 425 PANTHER OS01G0588500 PROTEIN-RELATED 12 420 - -
Pvu1g1849 425 MobiDBLite consensus disorder prediction 20 62 - -
Pvu1g1849 425 Gene3D Transferase(Phosphotransferase) domain 1 170 378 - -
Pvu1g1849 425 Pfam Protein kinase domain 85 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g1849 425 MobiDBLite consensus disorder prediction 373 409 - -
Pvu1g1849 425 Gene3D Phosphorylase Kinase; domain 1 64 169 - -
Pvu1g1849 425 PANTHER KINASE 1B 12 420 - -
Pvu1g1849 425 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1849 Pvu-Chr1 44227856 44233577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1849 1 362 Glycoside Hydrolase AT3G07070 40.591 3.47e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu1g1849 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1849 - - gmx:100813060 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1849 1 44227856 44233577 Pvu7g1542 7 36870936 36875031 PCT