Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1847 ATGAAGGGGAAGTTTCTGAGAGGGTGTCTTAACAAGTGGAAGAAAGTTGGGAGTCGAGTGATCCACTGTGGTGCCTACGATTACTGCTGCGAATGGGAAGTGTGGCCATCCATGCACGATGAAGGAGAATGCGATATTCCCAACGATGTGCCAAAGGGTCACTTGGTTGTGTACGTGGGGGAGCATCACAAGAGATATGTGATCAAGATCACGTTGCTCAACCATCCTCTCTTCAAGACTTTGCTGGATCAGGCTCAGGATGAGTACGATTTCATTGCATACTCAAAGCTCTATATTCCTTGCACTGAGCATCTTTTCCTCACTGTCCTTCGCTCTGCAAGCTCTCCAAATAATCAACCACTCTCTCTCTCTGTCTGA 378 0.4735 MKGKFLRGCLNKWKKVGSRVIHCGAYDYCCEWEVWPSMHDEGECDIPNDVPKGHLVVYVGEHHKRYVIKITLLNHPLFKTLLDQAQDEYDFIAYSKLYIPCTEHLFLTVLRSASSPNNQPLSLSV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1847 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 121 IPR003676 GO:0009733
Pvu1g1847 125 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 121 - -
Pvu1g1847 125 Pfam Auxin responsive protein 45 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1847 Pvu-Chr1 44210973 44211350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1847 45 110 Calmodulin-binding Proteins AT4G34750 46.970 6.34e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1847 K14488 - gmx:100814645 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1847 1 44210973 44211350 Pvu1g1847 1 44210973 44211350 ECH
Pvu1g1847 1 44210973 44211350 Pvu7g1545 7 36913987 36914355 PCT