Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1825 ATGTTCATATTCATGGACAAAGATGCTAATTTAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAAGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCCGGCTCATTCATAGCAGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCGAAGTAAAGCTTTGTTTGGGGAGGATGAATGGTATTTCTTTACTCCCAGGGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGCTTCTGGTTATTGGAAGGCTACTGGCACTGACAAACCCATTTTTACTTCATGTGGGATGAAGAATATTGGAGTGAAGAAGGCCCTAGTGTTCTACATGGGTCGCGCACCCAAAGGATCTAAAACTGATTGGATCATGCACGAGTACAGGTTGCAGAATTCCATGATCTCCATTCCACAGCAAAGAGGGTCCATGAGACTGGATGAGTGGGTGCTGTGCCGGGTCCGACAGAAAACTGGCAGCACAAGAAGCACTTGGGAAGACTCAAATGAATCTATTCATGAACCAACACGCCACTTTCCAGAAATGAATAAGAACTCAAATCCTGAACCAGCCAAAAATTGTATTGGCATAGCCTCAGGCTCAGGCTTTGGTTGTAATAATGATGTAAAAGCATATGCTTCATGGTATGATGACAACTCGAATATAGTAATTGGAGCACAGTTTATGGCACCTGTAACTGAGGGCTTGTTTAATCCACTGAAGAGAAAAAACATTGAAGAGAACGATCGGTTGGACTTGCTCAATAAAAAAATAAGCGAAGAAGTTGATGTTGGGAAACAAAGAGTTGAGAAAGATGTAAACAAAGGCTACAATTTCAATAACTTTGACCACTGGACTTCCATCATACAACCCCGAGTTTAA 918 0.4205 MFIFMDKDANLEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPGSFIAEIDLYKYNPWELRSKALFGEDEWYFFTPRDRKYPNGVRPNRAAASGYWKATGTDKPIFTSCGMKNIGVKKALVFYMGRAPKGSKTDWIMHEYRLQNSMISIPQQRGSMRLDEWVLCRVRQKTGSTRSTWEDSNESIHEPTRHFPEMNKNSNPEPAKNCIGIASGSGFGCNNDVKAYASWYDDNSNIVIGAQFMAPVTEGLFNPLKRKNIEENDRLDLLNKKISEEVDVGKQRVEKDVNKGYNFNNFDHWTSIIQPRV* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1825 305 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pvu1g1825 305 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 198 - -
Pvu1g1825 305 PANTHER NAC TRANSCRIPTION FACTOR 56 6 198 - -
Pvu1g1825 305 MobiDBLite consensus disorder prediction 174 199 - -
Pvu1g1825 305 Gene3D NAC domain 24 173 IPR036093 GO:0003677|GO:0006355
Pvu1g1825 305 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Pvu1g1825 305 ProSiteProfiles NAC domain profile. 15 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1825 Pvu-Chr1 43938987 43940391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1825 14 178 NAC Transcription Factor Family AT1G61110 67.630 7.36e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu1g1825 NAM 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1825 - - gmx:100788799 499.975